RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SAMHD1Q9Y3Z3 626 aaKnown RBP17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 SESN1Q9Y6P5 492 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 LAMP2P13473 410 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 SLC7A2P52569 658 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 SPIBQ01892 262 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 LGALS3BPQ08380 585 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 INAQ16352 499 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 GALNT18Q6P9A2 607 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 NET1Q7Z628 596 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 GKN2Q86XP6 184 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 MTERF3Q96E29 417 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 DPYSL5Q9BPU6 564 aa17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 NUSAP1Q9BXS6 441 aaKnown RBP17.46■□□□□ 0.39
CDC42EP3-201ENST00000295324 OR4F21O95013 312 aa17.46■□□□□ 0.38
CDC42EP3-201ENST00000295324 ATP6V1G2O95670 118 aa17.46■□□□□ 0.38
CDC42EP3-201ENST00000295324 SRSF11Q05519 484 aaKnown RBP17.46■□□□□ 0.38
CDC42EP3-201ENST00000295324 METTL21CQ5VZV1 264 aa17.46■□□□□ 0.38
CDC42EP3-201ENST00000295324 PEX5LQ8IYB4 626 aa17.46■□□□□ 0.38
CDC42EP3-201ENST00000295324 FSTL5Q8N475 847 aaPredicted RBP17.46■□□□□ 0.38
CDC42EP3-201ENST00000295324 EFCAB11Q9BUY7 163 aa17.46■□□□□ 0.38
CDC42EP3-201ENST00000295324 TMEM27Q9HBJ8 222 aa17.46■□□□□ 0.38
CDC42EP3-201ENST00000295324 KLHL1Q9NR64 748 aa17.46■□□□□ 0.38
CDC42EP3-201ENST00000295324 RUVBL1Q9Y265 456 aaKnown RBP17.46■□□□□ 0.38
CDC42EP3-201ENST00000295324 K7EPI3 171 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 CPN2P22792 545 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 AP1S2P56377 157 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 DCBLD1Q8N8Z6 715 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 HHIPL1Q96JK4 782 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 C7orf26Q96N11 449 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 TMEM109Q9BVC6 243 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 ANKHQ9HCJ1 492 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 SSU72Q9NP77 194 aaKnown RBP17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 SAMD4AQ9UPU9 718 aaKnown RBP17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 C9J4A7 227 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 POP7O75817 140 aaKnown RBP17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 CLCNKAP51800 687 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 PSMD4P55036 377 aaKnown RBP17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 APLFQ8IW19 511 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 PRSS58Q8IYP2 241 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 MAGEE2Q8TD90 523 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 KLHDC7BQ96G42 594 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 TUBGCP5Q96RT8 1024 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 PTPN18Q99952 460 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 TRIM8Q9BZR9 551 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 PTGES3LE9PB15 166 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 HNMTP50135 292 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 SMYD1Q8NB12 490 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 DNASE1L2Q92874 299 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 C5orf34Q96MH7 638 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 TMEM209Q96SK2 561 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 PAPOLBQ9NRJ5 636 aaKnown RBP17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 HCN3Q9P1Z3 774 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 CLDN7O95471 211 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 CTSAP10619 480 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 HLA-EP13747 358 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 FECHP22830 423 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 RAB33AQ14088 237 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 PYDC1Q8WXC3 89 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 HSD3B7Q9H2F3 369 aa17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 NSUN3Q9H649 340 aaKnown RBP17.45■□□□□ 0.38
CDC42EP3-201ENST00000295324 CNTN5O94779 1100 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 CST1P01037 141 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 ATP1B2P14415 290 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 AGXTP21549 392 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 CCR8P51685 355 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 DGKKQ5KSL6 1271 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 BEND5Q7L4P6 421 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 CLN6Q9NWW5 311 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 MYRFQ9Y2G1 1151 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 HEPACAM2A8MVW5 462 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 KMOO15229 486 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 GJB5O95377 273 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 PLA2G16P53816 162 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 SLC13A2Q13183 592 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 EIF4HQ15056 248 aaKnown RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 KCTD19Q17RG1 926 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 FBXO48Q5FWF7 155 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 SLC9A4Q6AI14 798 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 LRIG1Q96JA1 1093 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 CEP295NLQ96MC4 621 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 ZNF641Q96N77 438 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 CALML5Q9NZT1 146 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 FAM25AB3EWG3 89 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 FAM25CB3EWG5 89 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 FAM25GB3EWG6 89 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 TMEM63AO94886 807 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 OAZ2O95190 189 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 CTSOP43234 321 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 SLC25A11Q02978 314 aaKnown RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 LRRC74BQ6ZQY2 392 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 ARHGAP36Q6ZRI8 547 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 TEX47Q8TBZ9 253 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 SETD7Q8WTS6 366 aaKnown RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 PCDHB11Q9Y5F2 797 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 KDM3BQ7LBC6 1761 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 KERAO60938 352 aa17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 KLF8O95600 359 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP3-201ENST00000295324 HOXA11P31270 313 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms