RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 PHACTR4Q8IZ21 702 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 FLAD1Q8NFF5 587 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 CD274Q9NZQ7 290 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 EIF2B4Q9UI10 523 aaKnown RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 CPA4Q9UI42 421 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF221Q9UK13 617 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 PIRO00625 290 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 CD3EAPO15446 510 aaKnown RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 TSPAN3O60637 253 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF682O95780 498 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 PTPN2P17706 415 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 CAMK2BQ13554 666 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ACOX1Q15067 660 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ZBTB6Q15916 424 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF404Q494X3 552 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 NOTUMQ6P988 496 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 DCP2Q8IU60 420 aaKnown RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 SVOPLQ8N434 492 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 STAG3L4Q8TBR4 150 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 TRIB2Q92519 343 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 RDH12Q96NR8 316 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF300Q96RE9 604 aaPredicted RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 CDK5RAP1Q96SZ6 601 aaKnown RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 EMILIN2Q9BXX0 1053 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 SLIRPQ9GZT3 109 aaKnown RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 SP140LQ9H930 580 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 TMEM30AQ9NV96 361 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 VAPAQ9P0L0 249 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 DERAQ9Y315 318 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ARL5AQ9Y689 179 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ARVCFO00192 962 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 CXCR6O00574 342 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 DIRAS1O95057 198 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 CCDC159P0C7I6 412 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 HOXA11P31270 313 aaPredicted RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ZFP36L2P47974 494 aaKnown RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 NFKB2Q00653 900 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 SGO1Q5FBB7 561 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 KIAA0319Q5VV43 1072 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 MILR1Q7Z6M3 343 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ZFAND4Q86XD8 727 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 OR13C4Q8NGS5 318 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 OR5K1Q8NHB7 308 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 METTL6Q8TCB7 284 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 TSPEARQ8WU66 669 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 KCTD13Q8WZ19 329 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 DEPDC7Q96QD5 511 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ATOH8Q96SQ7 321 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 CATSPERBQ9H7T0 1116 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 AMBNQ9NP70 447 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 CRTAC1Q9NQ79 661 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ADPRHL2Q9NX46 363 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 SMPD4Q9NXE4 827 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 UXTQ9UBK9 157 aaPredicted RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 CDH9Q9ULB4 789 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 UGT2A1Q9Y4X1 527 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 COL4A5P29400 1685 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF646O15015 1829 aaPredicted RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 SLC7A4O43246 635 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 AIREO43918 545 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 PAGE1O75459 146 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 UROSP10746 265 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 PIK3CGP48736 1102 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 HTR6P50406 440 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 SMUG1Q53HV7 270 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 TPRG1LQ5T0D9 272 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 MRNIPQ6NTE8 343 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 DLEU7Q6UYE1 221 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 GPRIN3Q6ZVF9 776 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 ELMOD1Q8N336 334 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 SETD9Q8NE22 299 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 UBE2FQ969M7 185 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 YIPF6Q96EC8 236 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 PCED1BQ96HM7 432 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 FCRL2Q96LA5 508 aaPredicted RBP10.11□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF583Q96ND8 569 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 ZBTB18Q99592 522 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 TRIM39Q9HCM9 518 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 CNGB3Q9NQW8 809 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 KIF17Q9P2E2 1029 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 RGS17Q9UGC6 210 aaPredicted RBP10.11□□□□□ -0.79
LMX1A-201ENST00000294816 FBXO10Q9UK96 956 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 ELOVL7A1L3X0 281 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 M0QX08 132 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 CCRL2O00421 344 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 DNAJB5O75953 348 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 PRSS23O95084 383 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 SERPINA1P01009 418 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 DNTTP04053 509 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 SLC2A4P14672 509 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 FDXRP22570 491 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 PNPLA4P41247 253 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 CYP4F3Q08477 520 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 GRIK4Q16099 956 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 GTDC1Q4AE62 458 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 VARS2Q5ST30 1063 aaKnown RBP10.11□□□□□ -0.79
LMX1A-201ENST00000294816 CYP20A1Q6UW02 462 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 CLHC1Q8NHS4 586 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 PYCR2Q96C36 320 aa10.11□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF599Q96NL3 588 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms