RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 EPHX4Q8IUS5 362 aa15.55■□□□□ 0.08
NCKIPSD-201ENST00000294129 EGFL6Q8IUX8 553 aa15.55■□□□□ 0.08
NCKIPSD-201ENST00000294129 SLC39A11Q8N1S5 342 aa15.55■□□□□ 0.08
NCKIPSD-201ENST00000294129 FIBCD1Q8N539 461 aa15.55■□□□□ 0.08
NCKIPSD-201ENST00000294129 OSBPL11Q9BXB4 747 aa15.55■□□□□ 0.08
NCKIPSD-201ENST00000294129 FAM126AQ9BYI3 521 aaPredicted RBP15.55■□□□□ 0.08
NCKIPSD-201ENST00000294129 IL21Q9HBE4 155 aa15.55■□□□□ 0.08
NCKIPSD-201ENST00000294129 PFDN4Q9NQP4 134 aa15.55■□□□□ 0.08
NCKIPSD-201ENST00000294129 PCDHB1Q9Y5F3 818 aa15.55■□□□□ 0.08
NCKIPSD-201ENST00000294129 TAPBPO15533 448 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 PIM1P11309 404 aaPredicted RBP15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 PCNAP12004 261 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 BNIP2Q12982 314 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 MYLK3Q32MK0 819 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 SNX20Q7Z614 316 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 ADGRG5Q8IZF4 528 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 TRIML2Q8N7C3 387 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 MRPS31Q92665 395 aaKnown RBP15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 VPS50Q96JG6 964 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 C1QTNF3Q9BXJ4 246 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 TRIM54Q9BYV2 358 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 RETREG1Q9H6L5 497 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 PRM3Q9NNZ6 103 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 ABCB8Q9NUT2 735 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 AP1G1O43747 822 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 FKTNO75072 461 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 EEDO75530 441 aaKnown RBP15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 EFEMP2O95967 443 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 CERS6Q6ZMG9 384 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 RNF145Q96MT1 663 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 MRPS26Q9BYN8 205 aaKnown RBP15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 ZDHHC6Q9H6R6 413 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 ATP13A3Q9H7F0 1226 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 OPTCQ9UBM4 332 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 MTX2O75431 263 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 CXCL10P02778 98 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 RAB33AQ14088 237 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 ZBTB2Q8N680 514 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 GPR26Q8NDV2 337 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 TSPAN14Q8NG11 270 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 NCSTNQ92542 709 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 ULK4Q96C45 1275 aa15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 DDX18Q9NVP1 670 aaKnown RBP15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 DUS2Q9NX74 493 aaKnown RBP15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 INTS6Q9UL03 887 aaKnown RBP15.54■□□□□ 0.08
NCKIPSD-201ENST00000294129 FAM234BA2RU67 622 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 LSM1O15116 133 aaKnown RBP15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 OTCP00480 354 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 ACRV1P26436 265 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 HSPA14Q0VDF9 509 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 TRAF3Q13114 568 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 CPSF6Q16630 551 aaKnown RBP eCLIP15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 IMPG1Q17R60 797 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 OTUD3Q5T2D3 398 aaPredicted RBP15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 LCN8Q6JVE9 175 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 ARHGAP22Q7Z5H3 698 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 OFCC1Q8IZS5 231 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 ZNF786Q8N393 782 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 B4GALNT2Q8NHY0 566 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 EZH1Q92800 747 aaPredicted RBP15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 ZUFSPQ96AP4 578 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 MPP4Q96JB8 637 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 SLC2A11Q9BYW1 496 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 BRINP2Q9C0B6 783 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 RPF2Q9H7B2 306 aaKnown RBP15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 ZNF696Q9H7X3 374 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 ARMC1Q9NVT9 282 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 COMMD3-BMI1R4GMX3 469 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 AQP12BA6NM10 295 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 HNRNPRO43390 633 aaKnown RBP15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 IGSF6O95976 241 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 CAPNS1P04632 268 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 PSMA3P25788 255 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 NFKBIAP25963 317 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 LRRC66Q68CR7 880 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 ZNF783Q6ZMS7 281 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 AQP12AQ8IXF9 295 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 ZFP28Q8NHY6 868 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 MAGEE2Q8TD90 523 aaPredicted RBP15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 TMIGD2Q96BF3 282 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 CEP295NLQ96MC4 621 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 CORO1BQ9BR76 489 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 ACTL8Q9H568 366 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 SMOXQ9NWM0 555 aa15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 TNPO3Q9Y5L0 923 aaKnown RBP15.53■□□□□ 0.08
NCKIPSD-201ENST00000294129 EI24O14681 340 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 UGT2B4P06133 528 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 ACRP10323 421 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 DGKAP23743 735 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 ADARP55265 1226 aaKnown RBP15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 PLEKHG6Q3KR16 790 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 PDCD4Q53EL6 469 aaKnown RBP15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 Q6ZNB5 142 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 ZFAND4Q86XD8 727 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 PYCR2Q96C36 320 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 FBXL20Q96IG2 436 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 AGPAT4Q9NRZ5 378 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 TMEM39AQ9NV64 488 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 SPG21Q9NZD8 308 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 STOML2Q9UJZ1 356 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms