RNA–Protein interactions for RNA: ENST00000284273.5

UBASH3B-201, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3B, Length 6,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-201ENST00000284273 HEXBP07686 556 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 CTSKP43235 329 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 KYAT3Q6YP21 454 aaKnown RBP11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 THAP5Q7Z6K1 395 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 TMPRSS6Q8IU80 811 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 GATSQ8NAP1 163 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 ZNF296Q8WUU4 475 aaPredicted RBP11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 B3GNT4Q9C0J1 378 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 GIN1Q9NXP7 522 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 ENOPH1Q9UHY7 261 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 TBC1D24Q9ULP9 559 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 HPSEQ9Y251 543 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 MST1RQ04912 1400 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 hCG_1818297A0A087WSY0 165 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 TRAFD1O14545 582 aaPredicted RBP11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 HCRTO43612 131 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 VARSP26640 1264 aaKnown RBP11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 MTHFRP42898 656 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 PSME3P61289 254 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 ZNF844Q08AG5 666 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 IL18Q14116 193 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 CLEC12AQ5QGZ9 265 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 TATDN1Q6P1N9 297 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 ATG14Q6ZNE5 492 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 WDR60Q8WVS4 1066 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 CLDN9O95484 217 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 CYP1A2P05177 515 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 SPATA31C1P0DKV0 1188 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 GBE1Q04446 702 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 PDGFRLQ15198 375 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 TIGD5Q53EQ6 642 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 C1orf189Q5VU69 101 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 SLC29A4Q7RTT9 530 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 LRRC49Q8IUZ0 686 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 CSPG4P5Q96PW8 444 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 C1QTNF1Q9BXJ1 281 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 ANKHQ9HCJ1 492 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 LOC100509620A0A075B734 347 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 A0A0J9YYE9 177 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 PEX14O75381 377 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 PDE9AO76083 593 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 UBXN7O94888 489 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 AP2A2O94973 939 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 ATP6V1G2O95670 118 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 NR4A1P22736 598 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 ARF3P61204 181 aaPredicted RBP11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 ARF1P84077 181 aaKnown RBP11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 BRMS1LQ5PSV4 323 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 VWA5B1Q5TIE3 1220 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 GPAT4Q86UL3 456 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 CUZD1Q86UP6 607 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 TRIM74Q86UV6 250 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 ZZZ3Q8IYH5 903 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 CMTM8Q8IZV2 173 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 TMEM125Q96AQ2 219 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 SH3YL1Q96HL8 342 aaPredicted RBP11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 RADILQ96JH8 1075 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 ATXN7L1Q9ULK2 861 aaPredicted RBP11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 TESMINQ9Y4I5 508 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 A0A1W2PQ45 241 aaPredicted RBP11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 A0A1W2PQY0 241 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 FAM86C2PA6NEL3 165 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 KCNU1A8MYU2 1149 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 NOL4O94818 638 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 CD247P20963 164 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 SLC26A3P40879 764 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 CD47Q08722 323 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 BNIP1Q12981 228 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 SEMA3AQ14563 771 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 GCNT6Q5T4J0 391 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 BEND4Q6ZU67 534 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 OR4K17Q8NGC6 315 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 NPLOC4Q8TAT6 608 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 TBC1D10AQ9BXI6 508 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 IFT46Q9NQC8 304 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 RAPGEFL1Q9UHV5 662 aa11.72□□□□□ -0.53
UBASH3B-201ENST00000284273 BTN3A3O00478 584 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 TFECO14948 347 aaPredicted RBP11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 GSC2O15499 205 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 TSPAN9O75954 239 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 CCR10P46092 362 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 SULT1C3Q6IMI6 304 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 VSTM1Q6UX27 236 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 OR10H4Q8NGA5 316 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 BRI3BPQ8WY22 251 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 PPP1R11O60927 126 aaPredicted RBP11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 PKMP14618 531 aaKnown RBP11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 VPS26BQ4G0F5 336 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 NEK5Q6P3R8 708 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 ZCCHC12Q6PEW1 402 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 TMC8Q8IU68 726 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 UBQLNLQ8IYU4 475 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 EFHD2Q96C19 240 aaPredicted RBP11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 GPR174Q9BXC1 333 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 TBC1D30Q9Y2I9 924 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 RPP14O95059 124 aaKnown RBP11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 ARL3P36405 182 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 RPL3P39023 403 aaKnown RBP11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 LILRA4P59901 499 aa11.71□□□□□ -0.53
UBASH3B-201ENST00000284273 EOGTQ5NDL2 527 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms