RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 MIR1-1HGQ9H1L0 117 aa11.2□□□□□ -0.62
SCLT1-201ENST00000281142 MRM3Q9HC36 420 aaKnown RBP11.2□□□□□ -0.62
SCLT1-201ENST00000281142 AIG1Q9NVV5 245 aa11.2□□□□□ -0.62
SCLT1-201ENST00000281142 SLCO3A1Q9UIG8 710 aa11.2□□□□□ -0.62
SCLT1-201ENST00000281142 ASB1Q9Y576 335 aa11.2□□□□□ -0.62
SCLT1-201ENST00000281142 RANBP2P49792 3224 aaKnown RBP11.19□□□□□ -0.62
SCLT1-201ENST00000281142 SUPT3HB4E1H0 165 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 TNFRSF10AO00220 468 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 MATN3O15232 486 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 EEDO75530 441 aaKnown RBP11.19□□□□□ -0.62
SCLT1-201ENST00000281142 MOCS2O96007 188 aaPredicted RBP11.19□□□□□ -0.62
SCLT1-201ENST00000281142 CDH1P12830 882 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 CD86P42081 329 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 NR4A2P43354 598 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 POLR2JP52435 117 aaKnown RBP11.19□□□□□ -0.62
SCLT1-201ENST00000281142 NCS1P62166 190 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 FOXM1Q08050 763 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 RBM48Q5RL73 367 aaKnown RBP11.19□□□□□ -0.62
SCLT1-201ENST00000281142 KDELC1Q6UW63 502 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 LIMS2Q7Z4I7 341 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 TFAP2DQ7Z6R9 452 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 ITFG1Q8TB96 612 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 HTRA1Q92743 480 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 HDAC2Q92769 488 aaKnown RBP11.19□□□□□ -0.62
SCLT1-201ENST00000281142 GLMNQ92990 594 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 NT5MQ9NPB1 228 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 C8orf4Q9NR00 106 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 PNMA8BQ9ULN7 279 aaPredicted RBP11.19□□□□□ -0.62
SCLT1-201ENST00000281142 IFT52Q9Y366 437 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 IPPQ9Y573 584 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 U3KQV3 271 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 MEIS3P2A8K0S8 358 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 SLC1A7O00341 560 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 NDUFS2O75306 463 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 GUCY1B2O75343 617 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 SLC22A3O75751 556 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 EIF2S1P05198 315 aaKnown RBP11.19□□□□□ -0.62
SCLT1-201ENST00000281142 UMPSP11172 480 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 SYN1P17600 705 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 WARSP23381 471 aaKnown RBP11.19□□□□□ -0.62
SCLT1-201ENST00000281142 AFF1P51825 1210 aaKnown RBP11.19□□□□□ -0.62
SCLT1-201ENST00000281142 AIF1P55008 147 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 EEFSECP57772 596 aaKnown RBP11.19□□□□□ -0.62
SCLT1-201ENST00000281142 DSC2Q02487 901 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 DGCR6Q14129 220 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 LAIR1Q6GTX8 287 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 SULT1C3Q6IMI6 304 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 SPESP1Q6UW49 350 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 USP43Q70EL4 1123 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 FRA10AC1Q70Z53 315 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 CYP2U1Q7Z449 544 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 SYVN1Q86TM6 617 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 ZCCHC7Q8N3Z6 543 aaKnown RBP11.19□□□□□ -0.62
SCLT1-201ENST00000281142 FIG4Q92562 907 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 CDK15Q96Q40 435 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 ATOH8Q96SQ7 321 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 BTBD2Q9BX70 525 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 FAM105AQ9NUU6 356 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 ANKMY1Q9P2S6 941 aa11.19□□□□□ -0.62
SCLT1-201ENST00000281142 G3V2T6 193 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 DEAF1O75398 565 aaPredicted RBP11.18□□□□□ -0.62
SCLT1-201ENST00000281142 GMNNO75496 209 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 PRSS23O95084 383 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 PARNO95453 639 aaKnown RBP11.18□□□□□ -0.62
SCLT1-201ENST00000281142 HTR1EP28566 365 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 SERPINH1P50454 418 aaKnown RBP11.18□□□□□ -0.62
SCLT1-201ENST00000281142 NFKB2Q00653 900 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 EMX1Q04741 257 aaPredicted RBP11.18□□□□□ -0.62
SCLT1-201ENST00000281142 EMX2Q04743 252 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 LAPTM4AQ15012 233 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 SV2CQ496J9 727 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 CLIP4Q8N3C7 705 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 FAR1Q8WVX9 515 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 RPL3LQ92901 407 aaKnown RBP11.18□□□□□ -0.62
SCLT1-201ENST00000281142 NODALQ96S42 347 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 HTATIP2Q9BUP3 242 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 ERVK-18Q9QC07 812 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 PCDHGA3Q9Y5H0 932 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 HHLA1C9JL84 531 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 CHEK2O96017 543 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 GOT2P00505 430 aaKnown RBP11.18□□□□□ -0.62
SCLT1-201ENST00000281142 FMO3P31513 532 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 CCR1P32246 355 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 YWHAHQ04917 246 aaPredicted RBP11.18□□□□□ -0.62
SCLT1-201ENST00000281142 CRY1Q16526 586 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 PPP2R2DQ66LE6 453 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 CCDC81Q6ZN84 652 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 PLEKHG7Q6ZR37 379 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 MMAAQ8IVH4 418 aaKnown RBP11.18□□□□□ -0.62
SCLT1-201ENST00000281142 ATP6V0D2Q8N8Y2 350 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 OR7A2PQ8NGA2 310 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 PROKR1Q8TCW9 393 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 CAPSLQ8WWF8 208 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 ISG20Q96AZ6 181 aaKnown RBP11.18□□□□□ -0.62
SCLT1-201ENST00000281142 PGAP3Q96FM1 320 aaPredicted RBP11.18□□□□□ -0.62
SCLT1-201ENST00000281142 MAGED4Q96JG8 741 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 PRKD2Q9BZL6 878 aa11.18□□□□□ -0.62
SCLT1-201ENST00000281142 WDR12Q9GZL7 423 aaKnown RBP11.18□□□□□ -0.62
SCLT1-201ENST00000281142 LEF1Q9UJU2 399 aaPredicted RBP11.18□□□□□ -0.62
SCLT1-201ENST00000281142 ZNF229Q9UJW7 825 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms