RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 KLHL25Q9H0H3 589 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 EBF1Q9UH73 591 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 COCHO43405 550 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 UROSP10746 265 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 IL7RP16871 459 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 MAPK8P45983 427 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 SERINC3Q13530 473 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 ZCCHC7Q8N3Z6 543 aaKnown RBP19.55■□□□□ 0.72
CSPG5-201ENST00000264723 TRPV3Q8NET8 790 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 OR52B6Q8NGF0 335 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 AURKBQ96GD4 344 aaPredicted RBP19.55■□□□□ 0.72
CSPG5-201ENST00000264723 SGIP1Q9BQI5 828 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 AARSD1Q9BTE6 412 aaKnown RBP19.55■□□□□ 0.72
CSPG5-201ENST00000264723 WRAP53Q9BUR4 548 aaKnown RBP19.55■□□□□ 0.72
CSPG5-201ENST00000264723 USP22Q9UPT9 525 aa19.55■□□□□ 0.72
CSPG5-201ENST00000264723 DIRAS1O95057 198 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 ELK4P28324 431 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 RFX3P48380 749 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 C11orf84Q9BUA3 381 aaPredicted RBP19.54■□□□□ 0.72
CSPG5-201ENST00000264723 OCEL1Q9H607 264 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 MCM3APO60318 1980 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 FBP2O00757 339 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 FAM20BO75063 409 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 CYP2A6P11509 494 aaPredicted RBP19.54■□□□□ 0.72
CSPG5-201ENST00000264723 MYCLP1P12525 358 aaPredicted RBP19.54■□□□□ 0.72
CSPG5-201ENST00000264723 CD1DP15813 335 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 CYP4F2P78329 520 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 CYP4F3Q08477 520 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 TRAP1Q12931 704 aaKnown RBP19.54■□□□□ 0.72
CSPG5-201ENST00000264723 NSUN3Q9H649 340 aaKnown RBP19.54■□□□□ 0.72
CSPG5-201ENST00000264723 ANKRD31Q8N7Z5 1873 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 UPK3BL1B0FP48 263 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 UPK3BL2E5RIL1 263 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 DENRO43583 198 aaKnown RBP19.54■□□□□ 0.72
CSPG5-201ENST00000264723 OXTRP30559 389 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 BIRC7Q96CA5 298 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 GSTO2Q9H4Y5 243 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 AMBNQ9NP70 447 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 MIEF1Q9NQG6 463 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 SLAMF8Q9P0V8 285 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 TBC1D30Q9Y2I9 924 aa19.54■□□□□ 0.72
CSPG5-201ENST00000264723 LOC100506127A0A0U1RQW1 187 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 C2orf78A6NCI8 922 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 B4GAT1O43505 415 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 THRBP10828 461 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 SDE2Q6IQ49 451 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 LINC01465Q8N7H1 131 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 SH3GL1Q99961 368 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 TMEM165Q9HC07 324 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 ANKRD66B4E2M5 251 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 ALOX15P16050 662 aaPredicted RBP19.53■□□□□ 0.72
CSPG5-201ENST00000264723 CHI3L1P36222 383 aaPredicted RBP19.53■□□□□ 0.72
CSPG5-201ENST00000264723 GPR1P46091 355 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 DNAJB13P59910 316 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 PTGR1Q14914 329 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 TTC23Q5W5X9 447 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 CMTR2Q8IYT2 770 aaKnown RBP19.53■□□□□ 0.72
CSPG5-201ENST00000264723 SH3RF2Q8TEC5 729 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 NUDT8Q8WV74 236 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 VPS4AQ9UN37 437 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 CLCA2Q9UQC9 943 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 MAGED1Q9Y5V3 778 aaPredicted RBP19.53■□□□□ 0.72
CSPG5-201ENST00000264723 ZNF182P17025 639 aaPredicted RBP19.53■□□□□ 0.72
CSPG5-201ENST00000264723 MAPK1P28482 360 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 CAPGP40121 348 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 ARCN1P48444 511 aaKnown RBP19.53■□□□□ 0.72
CSPG5-201ENST00000264723 NEK2P51955 445 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 STC1P52823 247 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 XKR6Q5GH73 641 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 SMYD5Q6GMV2 418 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 SPATA19Q7Z5L4 167 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 RETREG3Q86VR2 466 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 SLC47A1Q96FL8 570 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 C1QTNF1Q9BXJ1 281 aa19.53■□□□□ 0.72
CSPG5-201ENST00000264723 C6orf62Q9GZU0 229 aaPredicted RBP19.53■□□□□ 0.72
CSPG5-201ENST00000264723 IFT80Q9P2H3 777 aaPredicted RBP19.53■□□□□ 0.72
CSPG5-201ENST00000264723 CLDN7O95471 211 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 ELFN1P0C7U0 828 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 COX7A2P14406 83 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 CDH2P19022 906 aaPredicted RBP19.52■□□□□ 0.72
CSPG5-201ENST00000264723 SERPINB10P48595 397 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 GTF2H2Q13888 395 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 DENND5AQ6IQ26 1287 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 GTF2H2CQ6P1K8 395 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 PAWRQ96IZ0 340 aaKnown RBP19.52■□□□□ 0.72
CSPG5-201ENST00000264723 MEAF6Q9HAF1 191 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 IMPAD1Q9NX62 359 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 SELENONQ9NZV5 590 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 SCAMP1O15126 338 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 LIX1Q8N485 282 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 MUS81Q96NY9 551 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 EBPLQ9BY08 206 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 BRD9Q9H8M2 597 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 TMEM248Q9NWD8 314 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 PADI4Q9UM07 663 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 hCG_2039718K7EN88 272 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 AXIN1O15169 862 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 RGS5O15539 181 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 RPIAP49247 311 aa19.52■□□□□ 0.72
CSPG5-201ENST00000264723 EIF2B2P49770 351 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms