RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 AQP12BA6NM10 295 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 PRR23D1E9PI22 279 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 OR10H3O60404 316 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 CHRNA1P02708 482 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 PRR23D2P0DMB1 279 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 ZNF37AP17032 561 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 C2orf80Q0P641 193 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 ARMC4Q5T2S8 1044 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 GET4Q7L5D6 327 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 AQP12AQ8IXF9 295 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 IMP4Q96G21 291 aaKnown RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 ADAMTS7Q9UKP4 1686 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TBC1D3DA0A087WVF3 549 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TBC1D3IA0A087WXS9 549 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TBC1D3EA0A087X179 549 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TBC1D3KA0A087X1G2 549 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 CCDC189A1A4V9 331 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TBC1D3FA6NER0 549 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TBC1D3LB9A6J9 549 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 ENPP3O14638 875 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 EIF2S1P05198 315 aaKnown RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TBC1D3HP0C7X1 549 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 SRSF11Q05519 484 aaKnown RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TBC1D3GQ6DHY5 549 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TBC1D3CQ6IPX1 549 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TBC1D3Q8IZP1 549 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 PNPT1Q8TCS8 783 aaKnown RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 RERGQ96A58 199 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TEFMQ96QE5 360 aaKnown RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 FNDC11Q9BVV2 318 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 RETREG1Q9H6L5 497 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 ZBTB26Q9HCK0 441 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-201ENST00000264555 AOC2O75106 756 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 ZNHIT3Q15649 155 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-201ENST00000264555 HLA-DQA1Q5Y7H0 255 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 CDC73Q6P1J9 531 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 C19orf18Q8NEA5 215 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 KIAA1191Q96A73 305 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 LRRC3Q9BY71 257 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 POPDC3Q9HBV1 291 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 ZNF780BQ9Y6R6 833 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 MYH14Q7Z406 1995 aaKnown RBP16.48■□□□□ 0.23
PHRF1-201ENST00000264555 SLC28A2O43868 658 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 FABP3P05413 133 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 ETS2P15036 469 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 NCK1P16333 377 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 GATAD2AQ86YP4 633 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 WFIKKN2Q8TEU8 576 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 HTATIP2Q9BUP3 242 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 NLE1Q9NVX2 485 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-201ENST00000264555 NKX1-2Q9UD57 310 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-201ENST00000264555 RAB23Q9ULC3 237 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 CAB39Q9Y376 341 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-201ENST00000264555 TLL2Q9Y6L7 1015 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 LOC100506127A0A0U1RQW1 187 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 GNAZP19086 355 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 ITGA1P56199 1179 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 CDHR3Q6ZTQ4 885 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 COLGALT2Q8IYK4 626 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 AMER2Q8N7J2 671 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 ARL10Q8N8L6 244 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 AUTS2Q8WXX7 1259 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 PCDHAC1Q9H158 963 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 EBF2Q9HAK2 575 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 RUVBL1Q9Y265 456 aaKnown RBP16.48■□□□□ 0.23
PHRF1-201ENST00000264555 CYP4B1P13584 511 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 HNMTP50135 292 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 RFTN2Q52LD8 501 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-201ENST00000264555 GDPD4Q6W3E5 623 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 PEX13Q92968 403 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 KLHL25Q9H0H3 589 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 ERVW-1Q9UQF0 538 aa16.48■□□□□ 0.23
PHRF1-201ENST00000264555 IGFBP5P24593 272 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 AQP1P29972 269 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 DPY19L1Q2PZI1 675 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 DGKKQ5KSL6 1271 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 TMEM130Q8N3G9 435 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 TOP1MTQ969P6 601 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 NUAK2Q9H093 628 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 COQ10BQ9H8M1 238 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 SEMA3GQ9NS98 782 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 MAFKO60675 156 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 SERPINI2O75830 405 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 XRCC1P18887 633 aaPredicted RBP16.47■□□□□ 0.23
PHRF1-201ENST00000264555 IDSP22304 550 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 EEFSECP57772 596 aaKnown RBP16.47■□□□□ 0.23
PHRF1-201ENST00000264555 CYP4F2P78329 520 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 CYP4F3Q08477 520 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 GCNT6Q5T4J0 391 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 SVOPLQ8N434 492 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 C11orf65Q8NCR3 313 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 SLC38A2Q96QD8 506 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 PAAF1Q9BRP4 392 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 PDP1Q9P0J1 537 aaPredicted RBP16.47■□□□□ 0.23
PHRF1-201ENST00000264555 GALPQ9UBC7 116 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 A0A1B0GUL6 1792 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 CDC7O00311 574 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 MT-ND1P03886 318 aa16.47■□□□□ 0.23
PHRF1-201ENST00000264555 GALTP07902 379 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms