RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 GALNT7Q86SF2 657 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 TMPRSS12Q86WS5 348 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 PLXDC1Q8IUK5 500 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 PIANPQ8IYJ0 282 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 CCL4L1Q8NHW4 92 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 SEC14L1Q92503 715 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 TMEM74Q96NL1 305 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 FCRL3Q96P31 734 aaPredicted RBP12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 CYTH2Q99418 400 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 TRIM54Q9BYV2 358 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 SYTL2Q9HCH5 934 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 PRDM8Q9NQV8 689 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 IMP3Q9NV31 184 aaKnown RBP12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 CPNE7Q9UBL6 633 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 TBC1D29Q9UFV1 150 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 LNPEPQ9UIQ6 1025 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 TRMT6Q9UJA5 497 aaKnown RBP12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 BTBD3Q9Y2F9 522 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 RALGAPA1Q6GYQ0 2036 aa12.31□□□□□ -0.44
CLNS1A-201ENST00000263309 TNRC6BQ9UPQ9 1833 aaKnown RBP12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 ZCWPW2A0A1B0GU75 182 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 SPAARA0A1B0GVQ0 90 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 MATN2O00339 956 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 FUCA1P04066 466 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 HIST1H2AGP0C0S8 130 aaPredicted RBP12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 CBSLP0DN79 551 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 ENO3P13929 434 aaPredicted RBP12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 HIST1H2ADP20671 130 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 CBSP35520 551 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 FASLGP48023 281 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 LEPRP48357 1165 aaKnown RBP12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 ARL4DP49703 201 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 EPHA4P54764 986 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 NFE2L1Q14494 772 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 BRD3Q15059 726 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 KLHL38Q2WGJ6 581 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 GRTP1Q5TC63 336 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 FAM45BPQ6NSW5 357 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 RBM44Q6ZP01 1051 aaKnown RBP12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 TRMT10CQ7L0Y3 403 aaKnown RBP12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 KANSL1Q7Z3B3 1105 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 STRA8Q7Z7C7 330 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 NRROSQ86YC3 692 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 SLC35F3Q8IY50 421 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 SFRP1Q8N474 314 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 Q8N9G6 341 aaPredicted RBP12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 NOA1Q8NC60 698 aaKnown RBP12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 C2CD4AQ8NCU7 369 aaPredicted RBP12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 FAM45AQ8TCE6 357 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 TFGQ92734 400 aaPredicted RBP12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 KCNJ9Q92806 393 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 INPP5DQ92835 1189 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 ZDHHC12Q96GR4 267 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 HIST1H2AHQ96KK5 128 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 CPNE1Q99829 537 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 HIST1H2AJQ99878 128 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 CCDC3Q9BQI4 270 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 H2AFJQ9BTM1 129 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 WWP1Q9H0M0 922 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 COG4Q9H9E3 785 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 UCK1Q9HA47 277 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 LATS2Q9NRM7 1088 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 GRHL1Q9NZI5 618 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 TMPRSS11EQ9UL52 423 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 PSMD13Q9UNM6 376 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 ASF1AQ9Y294 204 aa12.3□□□□□ -0.44
CLNS1A-201ENST00000263309 A0A087WUV0 522 aaPredicted RBP12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 ESYT3A0FGR9 886 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 ZBTB14O43829 449 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 OR1I1O60431 355 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 S1PR4O95977 384 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 ITGB6P18564 788 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 DNAJC3Q13217 504 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 MSS51Q4VC12 460 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 STEAP4Q687X5 459 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 CAPN12Q6ZSI9 719 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 LDB1Q86U70 411 aaPredicted RBP12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 ZNF547Q8IVP9 402 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 TBC1D21Q8IYX1 336 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 NAGSQ8N159 534 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 ZBTB2Q8N680 514 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 GPATCH11Q8N954 259 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 KYQ8NBH2 561 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 BAHD1Q8TBE0 780 aaPredicted RBP12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 ADAMTS14Q8WXS8 1223 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 CCDC74AQ96AQ1 378 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 SLC22A18Q96BI1 424 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 TSNARE1Q96NA8 513 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 RAB11FIP5Q9BXF6 653 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 LRRN3Q9H3W5 708 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 FBXO6Q9NRD1 293 aaPredicted RBP12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 SLC23A2Q9UGH3 650 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 DMGDHQ9UI17 866 aaKnown RBP12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 SLC39A10Q9ULF5 831 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 CLCA2Q9UQC9 943 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 VWA7Q9Y334 891 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 PLEKHM1Q9Y4G2 1056 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 USP24Q9UPU5 2620 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 NUMA1Q14980 2115 aa12.29□□□□□ -0.44
CLNS1A-201ENST00000263309 EIF3FO00303 357 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms