RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 FERD3LQ96RJ6 166 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 APOL2Q9BQE5 337 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 CCM2Q9BSQ5 444 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 GBA3Q9H227 469 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 ACSS2Q9NR19 701 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 TMPRSS11EQ9UL52 423 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 PCDHA13Q9Y5I0 950 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 ARL5AQ9Y689 179 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 KCNMB2Q9Y691 235 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 ZFC3H1O60293 1989 aaKnown RBP11.96□□□□□ -0.49
TRAF4-202ENST00000262396 GOLGA6L9A6NEM1 432 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 OR5K3A6NET4 321 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 APOC4-APOC2K7ER74 178 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 SRP72O76094 671 aaKnown RBP11.96□□□□□ -0.49
TRAF4-202ENST00000262396 ZBTB11O95625 1053 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-202ENST00000262396 APOC2P02655 101 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 HADHAP40939 763 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 ARCN1P48444 511 aaKnown RBP11.96□□□□□ -0.49
TRAF4-202ENST00000262396 COPS2P61201 443 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 PPP1CAP62136 330 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 PTPRCAPQ14761 206 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 TCEAL1Q15170 157 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 ZRANB3Q5FWF4 1079 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 METRNLQ641Q3 311 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 PWWP2BQ6NUJ5 590 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 C11orf63Q6NUN7 778 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 DUS1LQ6P1R4 473 aaKnown RBP11.96□□□□□ -0.49
TRAF4-202ENST00000262396 FAM83HQ6ZRV2 1179 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-202ENST00000262396 TAS2R42Q7RTR8 314 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 CCDC170Q8IYT3 715 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 OR4E2Q8NGC2 313 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 OR2L2Q8NH16 312 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 LCN9Q8WX39 176 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 FCRL4Q96PJ5 515 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 INSM2Q96T92 566 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-202ENST00000262396 COPS8Q99627 209 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 GPR87Q9BY21 358 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 SRMSQ9H3Y6 488 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 ACTL8Q9H568 366 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 C10orf88Q9H8K7 445 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 KCND1Q9NSA2 647 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 MAP10Q9P2G4 905 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 FKBPLQ9UIM3 349 aa11.96□□□□□ -0.49
TRAF4-202ENST00000262396 ASH1LQ9NR48 2969 aaKnown RBP11.95□□□□□ -0.5
TRAF4-202ENST00000262396 CCDC66A2RUB6 948 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 TTLL8A6PVC2 850 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 VPS4BO75351 444 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 ZNF189O75820 626 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-202ENST00000262396 TJP3O95049 919 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 ATXN8OSP0DMR3 200 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 RBP3P10745 1247 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 POLR2CP19387 275 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-202ENST00000262396 NR1D1P20393 614 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 CYP2A7P20853 494 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 PSMB4P28070 264 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 HADHBP55084 474 aaKnown RBP11.95□□□□□ -0.5
TRAF4-202ENST00000262396 RWDD2BP57060 319 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 TUBB4BP68371 445 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 OTUD4Q01804 1114 aaKnown RBP11.95□□□□□ -0.5
TRAF4-202ENST00000262396 ADCY2Q08462 1091 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 TUBB2AQ13885 445 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 GPR19Q15760 415 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 FAM199XQ6PEV8 388 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-202ENST00000262396 ARHGEF18Q6ZSZ5 1173 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 BBS12Q6ZW61 710 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 OR8K5Q8NH50 307 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 ACTL9Q8TC94 416 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 HM13Q8TCT9 377 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 ZFPM2Q8WW38 1151 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 THAP4Q8WY91 577 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 CPT1BQ92523 772 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 SLC41A2Q96JW4 573 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 CALR3Q96L12 384 aaKnown RBP11.95□□□□□ -0.5
TRAF4-202ENST00000262396 TBL1YQ9BQ87 522 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 TUBB2BQ9BVA1 445 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 FAM96AQ9H5X1 160 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 SMOXQ9NWM0 555 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 IRAK4Q9NWZ3 460 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 TLK1Q9UKI8 766 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 VPS4AQ9UN37 437 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 SNX7Q9UNH6 387 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 FARSAQ9Y285 508 aaKnown RBP11.95□□□□□ -0.5
TRAF4-202ENST00000262396 TENM4Q6N022 2769 aa11.95□□□□□ -0.5
TRAF4-202ENST00000262396 ARGFXA6NJG6 315 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 MATN2O00339 956 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 TIAF1O95411 115 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 GAS8O95995 478 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 PTPN4P29074 926 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 PREPP48147 710 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 MARCKSL1P49006 195 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 CCL11P51671 97 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 PGDP52209 483 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 PMS2P54278 862 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 GSDMDP57764 484 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 FOXK1P85037 733 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 UBAP2LQ14157 1087 aaKnown RBP11.94□□□□□ -0.5
TRAF4-202ENST00000262396 TAZQ16635 292 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 ANKRD20A2Q5SQ80 823 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 ANKRD20A1Q5TYW2 823 aa11.94□□□□□ -0.5
TRAF4-202ENST00000262396 ANKRD20A3Q5VUR7 823 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms