RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CCDC63Q8NA47 563 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 CD200R1Q8TD46 325 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 TLCD1Q96CP7 247 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 ZCCHC2Q9C0B9 1178 aaKnown RBP27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 CYP4F12Q9HCS2 524 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 ZNF358Q9NW07 568 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 TAS2R13Q9NYV9 303 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 GULP1Q9UBP9 304 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 SLC23A2Q9UGH3 650 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 SLC17A4Q9Y2C5 497 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 A0A096LPK6 155 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 A0A1W2PR77 199 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 MAGEA12P43365 314 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 PRLHRP49683 370 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 KIAA1024LP59773 190 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 TIFABQ6ZNK6 161 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 PLD6Q8N2A8 252 aaKnown RBP27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 ZBTB44Q8NCP5 570 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 HEXDCQ8WVB3 486 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 DNASE2BQ8WZ79 361 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 KCNJ9Q92806 393 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 SPAG17Q6Q759 2223 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 ZNF318Q5VUA4 2279 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 VPS26AO75436 327 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 CD38P28907 300 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 ALDH3A1P30838 453 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 NUDT1P36639 197 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 GNPDA1P46926 289 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 RABIFP47224 123 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 CSNK1EP49674 416 aaKnown RBP27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 CSRP3P50461 194 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 PDAP1Q13442 181 aaKnown RBP27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 BOP1Q14137 746 aaKnown RBP27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 LYSMD4Q5XG99 296 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 C11orf96Q7Z7L8 435 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 OR56A4Q8NGH8 313 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 ISL2Q96A47 359 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 KLHDC7BQ96G42 594 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 WDR92Q96MX6 357 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 GPAMQ9HCL2 828 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 R4GN57 208 aa27.01■■□□□ 1.91
SMARCD3-201ENST00000262188 GALR2O43603 387 aaPredicted RBP27■■□□□ 1.91
SMARCD3-201ENST00000262188 RACK1P63244 317 aaKnown RBP27■■□□□ 1.91
SMARCD3-201ENST00000262188 DLG1Q12959 904 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 ZNF528Q3MIS6 628 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 AGBL2Q5U5Z8 902 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 PRR23BQ6ZRT6 265 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 CPNE9Q8IYJ1 553 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 FAM126AQ9BYI3 521 aaPredicted RBP27■■□□□ 1.91
SMARCD3-201ENST00000262188 DNAJC16Q9Y2G8 782 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 FRYLO94915 3013 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 PRSS38A1L453 326 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 GRID2O43424 1007 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 AP2A2O94973 939 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 SEC24CP53992 1094 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 YPEL5P62699 121 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 CDHR3Q6ZTQ4 885 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 CHST15Q7LFX5 561 aaPredicted RBP27■■□□□ 1.91
SMARCD3-201ENST00000262188 KCTD4Q8WVF5 259 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 ELMO1Q92556 727 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 TCEAL2Q9H3H9 227 aaPredicted RBP27■■□□□ 1.91
SMARCD3-201ENST00000262188 CARS2Q9HA77 564 aaKnown RBP27■■□□□ 1.91
SMARCD3-201ENST00000262188 KLF15Q9UIH9 416 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 TRMT6Q9UJA5 497 aaKnown RBP27■■□□□ 1.91
SMARCD3-201ENST00000262188 SLC12A4Q9UP95 1085 aa27■■□□□ 1.91
SMARCD3-201ENST00000262188 POP7O75817 140 aaKnown RBP26.99■■□□□ 1.91
SMARCD3-201ENST00000262188 WDR45BQ5MNZ6 344 aa26.99■■□□□ 1.91
SMARCD3-201ENST00000262188 PRAMEF14Q5SWL7 426 aa26.99■■□□□ 1.91
SMARCD3-201ENST00000262188 VRK3Q8IV63 474 aa26.99■■□□□ 1.91
SMARCD3-201ENST00000262188 ZNF232Q9UNY5 417 aa26.99■■□□□ 1.91
SMARCD3-201ENST00000262188 GPSM3Q9Y4H4 160 aa26.99■■□□□ 1.91
SMARCD3-201ENST00000262188 ST14Q9Y5Y6 855 aa26.99■■□□□ 1.91
SMARCD3-201ENST00000262188 COMMD10Q9Y6G5 202 aa26.99■■□□□ 1.91
SMARCD3-201ENST00000262188 WISP3O95389 354 aaPredicted RBP26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 HOXC4P09017 264 aaPredicted RBP26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 HTR1BP28222 390 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 PREPP48147 710 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 HSPA14Q0VDF9 509 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 SIM2Q14190 667 aaPredicted RBP26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 FZD2Q14332 565 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 ALG11Q2TAA5 492 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 BCL7AQ4VC05 210 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 ACSBG2Q5FVE4 666 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 XKR5Q6UX68 686 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 FAM83HQ6ZRV2 1179 aaPredicted RBP26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 OTOAQ7RTW8 1153 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 LZICQ8WZA0 190 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 CCM2Q9BSQ5 444 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 IQCGQ9H095 443 aaKnown RBP26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 GPR27Q9NS67 375 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 KLQ9UEF7 1012 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 RUVBL2Q9Y230 463 aaKnown RBP26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 DHRS7Q9Y394 339 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 H3BMM5 538 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 ACP5P13686 325 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 HPDP32754 393 aaPredicted RBP26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 LRRTM4Q86VH4 590 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 HID1Q8IV36 788 aa26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 CENPLQ8N0S6 344 aaPredicted RBP26.98■■□□□ 1.91
SMARCD3-201ENST00000262188 ZBTB2Q8N680 514 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms