RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 PLA2G2CQ5R387 149 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 PIP5KL1Q5T9C9 394 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 TRPM8Q7Z2W7 1104 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 RABEPKQ7Z6M1 372 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 OR14C36Q8NHC7 312 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 INPP5DQ92835 1189 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 TMEM237Q96Q45 408 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 ZSCAN5AQ9BUG6 496 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 TMEM120AQ9BXJ8 343 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 PNPOQ9NVS9 261 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 SERGEFQ9UGK8 458 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 PILRBQ9UKJ0 227 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 COQ6Q9Y2Z9 468 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 NUMA1Q14980 2115 aa17.18■□□□□ 0.34
SRSF1-201ENST00000258962 WNT9AO14904 365 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 KERAO60938 352 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 SLC25A14O95258 325 aaPredicted RBP17.17■□□□□ 0.34
SRSF1-201ENST00000258962 HSPA4LO95757 839 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 MTHFD2P13995 350 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 GNSP15586 552 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 IL2P60568 153 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 ASPHQ12797 758 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 TSNQ15631 228 aaKnown RBP17.17■□□□□ 0.34
SRSF1-201ENST00000258962 ZNF284Q2VY69 593 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 PRR23CQ6ZRP0 262 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 RAVER1Q8IY67 606 aaKnown RBP17.17■□□□□ 0.34
SRSF1-201ENST00000258962 LSMEM2Q8N112 164 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 DDHD1Q8NEL9 900 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 CEP76Q8TAP6 659 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 PIWIL2Q8TC59 973 aaKnown RBP17.17■□□□□ 0.34
SRSF1-201ENST00000258962 PPP4R1Q8TF05 950 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 SNX19Q92543 992 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 EXT2Q93063 718 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 CCDC126Q96EE4 140 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 SMOC1Q9H4F8 434 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 C6orf106Q9H6K1 298 aaPredicted RBP17.17■□□□□ 0.34
SRSF1-201ENST00000258962 NCKIPSDQ9NZQ3 722 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 SUSD2Q9UGT4 822 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 RRP15Q9Y3B9 282 aaKnown RBP17.17■□□□□ 0.34
SRSF1-201ENST00000258962 FADS3Q9Y5Q0 445 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 ANKRD12Q6UB98 2062 aa17.17■□□□□ 0.34
SRSF1-201ENST00000258962 UBXN8O00124 270 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 BTN3A1O00481 513 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 NPHS1O60500 1241 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 FSBPO95073 299 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TRIM16O95361 564 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 C6P13671 934 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 MAOBP27338 520 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 ARFIP2P53365 341 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 SF3A2Q15428 464 aaKnown RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 SPRED3Q2MJR0 410 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 AASDHQ4L235 1098 aaPredicted RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 SLC22A9Q8IVM8 553 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 PELI3Q8N2H9 469 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 CCNYL1Q8N7R7 359 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 ZNF781Q8N8C0 355 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 OR2T34Q8NGX1 318 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 FUBP1Q96AE4 644 aaKnown RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 RAB7BQ96AH8 199 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 AP2M1Q96CW1 435 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 PDLIM5Q96HC4 596 aaKnown RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 VPS35Q96QK1 796 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 MIR1-1HGQ9H1L0 117 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 ACTR5Q9H9F9 607 aaPredicted RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 LATS2Q9NRM7 1088 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TMEM74BQ9NUR3 256 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 DMDP11532 3685 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 WDR87Q6ZQQ6 2873 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TBC1D3DA0A087WVF3 549 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TBC1D3IA0A087WXS9 549 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TBC1D3EA0A087X179 549 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TBC1D3KA0A087X1G2 549 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TBC1D3FA6NER0 549 aaPredicted RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 PRR5-ARHGAP8B1AHC4 643 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TBC1D3LB9A6J9 549 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 SGTAO43765 313 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 MMP20O60882 483 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 MTX2O75431 263 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 RECQL5O94762 991 aaPredicted RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 SOD1P00441 154 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 CFIP05156 583 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TBC1D3HP0C7X1 549 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 MPSTP25325 297 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TAS2R38P59533 333 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 ARHGAP8P85298 464 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 DUOXA1Q1HG43 343 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TRIM61Q5EBN2 209 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 ARL13AQ5H913 290 aaPredicted RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 AGBL4Q5VU57 503 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 KIAA0895LQ68EN5 471 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TBC1D3GQ6DHY5 549 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TBC1D3CQ6IPX1 549 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 ZNF765Q7L2R6 523 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 PIWIL4Q7Z3Z4 852 aaKnown RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 MAVSQ7Z434 540 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 TBC1D3Q8IZP1 549 aaPredicted RBP17.16■□□□□ 0.34
SRSF1-201ENST00000258962 ZBTB2Q8N680 514 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 FITM2Q8N6M3 262 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 STAG3L4Q8TBR4 150 aa17.16■□□□□ 0.34
SRSF1-201ENST00000258962 BTN2A2Q8WVV5 523 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms