RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.06□□□□□ -0.964e-8■■■■■ 32.2
RPA1-201ENST00000254719 SNX29P2Q8IUI4 249 aa9.06□□□□□ -0.96
RPA1-201ENST00000254719 RASGRP3Q8IV61 690 aa9.06□□□□□ -0.96
RPA1-201ENST00000254719 TANKQ92844 425 aa9.06□□□□□ -0.96
RPA1-201ENST00000254719 CDKN2AIPNLQ96HQ2 116 aa9.06□□□□□ -0.96
RPA1-201ENST00000254719 CEP19Q96LK0 163 aa9.06□□□□□ -0.96
RPA1-201ENST00000254719 ERVK-6Q9BXR3 956 aa9.06□□□□□ -0.96
RPA1-201ENST00000254719 OSBPL6Q9BZF3 934 aa9.06□□□□□ -0.96
RPA1-201ENST00000254719 DPY30Q9C005 99 aa9.06□□□□□ -0.96
RPA1-201ENST00000254719 CCDC167Q9P0B6 97 aa9.06□□□□□ -0.96
RPA1-201ENST00000254719 RAB26Q9ULW5 256 aa9.06□□□□□ -0.96
RPA1-201ENST00000254719 SYN3O14994 580 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 KPNA5O15131 536 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 KDM1AO60341 852 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 SYNCRIPO60506 623 aaKnown RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 LILRB3O75022 631 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 STC2O76061 302 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 ABLIM3O94929 683 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 PABPC4LP0CB38 370 aaKnown RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 NR4A1P22736 598 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 EMP3P54852 163 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 B4GALNT1Q00973 533 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 FOLH1Q04609 750 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 DUSP4Q13115 394 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 TOP3AQ13472 1001 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 C16orf72Q14CZ0 275 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 MYLK3Q32MK0 819 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 ARMC12Q5T9G4 340 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 Q6ZNB5 142 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 SYVN1Q86TM6 617 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 DHRSXQ8N5I4 330 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 BHLHE22Q8NFJ8 381 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 ZFAND2BQ8WV99 257 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 EXOC2Q96KP1 924 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 C2orf49Q9BVC5 232 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 AFF4Q9UHB7 1163 aaKnown RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 ENOPH1Q9UHY7 261 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 SLC25A13Q9UJS0 675 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 AZIN1O14977 448 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 LRG1P02750 347 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 TCF3P15923 654 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 LPOP22079 712 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 SLC26A3P40879 764 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 CLCN2P51788 898 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 CRYBA2P53672 197 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 CREMQ03060 361 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.05□□□□□ -0.96
RPA1-201ENST00000254719 IL10RBQ08334 325 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 CSTF3Q12996 717 aaKnown RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 HECTD3Q5T447 861 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 FKBP9P1Q75LS8 142 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 LRRC8DQ7L1W4 858 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 GPR155Q7Z3F1 870 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 FAM217AQ8IXS0 508 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 SETD9Q8NE22 299 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 LPCAT1Q8NF37 534 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 OR52B6Q8NGF0 335 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 METTL6Q8TCB7 284 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 C2orf15Q8WU43 125 aaKnown RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 VPS50Q96JG6 964 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 AARSD1Q9BTE6 412 aaKnown RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 FAM126AQ9BYI3 521 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 MTIF3Q9H2K0 278 aaKnown RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 SDR39U1Q9NRG7 319 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 NLE1Q9NVX2 485 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 ZNF639Q9UID6 485 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 ANAPC2Q9UJX6 822 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 ZFP37Q9Y6Q3 630 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 A6NL46 340 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 CBX4O00257 560 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 QSOX1O00391 747 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 SGTAO43765 313 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 SNAP91O60641 907 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 RECQL5O94762 991 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 IGSF6O95976 241 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 POLR2IP36954 125 aaKnown RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 ATP1A4Q13733 1029 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 CHST15Q7LFX5 561 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 TRIM69Q86WT6 500 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 HORMAD1Q86X24 394 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 FAM86B1Q8N7N1 296 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 PTGR2Q8N8N7 351 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 ASB9Q96DX5 294 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 OTUB1Q96FW1 271 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 PSKH2Q96QS6 385 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 SEMA3CQ99985 751 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 HGH1Q9BTY7 390 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 APOL5Q9BWW9 433 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 ZNF334Q9HCZ1 680 aaPredicted RBP9.05□□□□□ -0.96
RPA1-201ENST00000254719 PCTPQ9UKL6 214 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 TRAF6Q9Y4K3 522 aa9.05□□□□□ -0.96
RPA1-201ENST00000254719 AGAP14A8MT82 685 aa9.04□□□□□ -0.96
RPA1-201ENST00000254719 CD3EAPO15446 510 aaKnown RBP9.04□□□□□ -0.96
RPA1-201ENST00000254719 CLOCKO15516 846 aa9.04□□□□□ -0.96
RPA1-201ENST00000254719 TPD52L2O43399 206 aaKnown RBP9.04□□□□□ -0.96
RPA1-201ENST00000254719 SMAD6O43541 496 aaKnown RBP9.04□□□□□ -0.96
RPA1-201ENST00000254719 CDK4P11802 303 aa9.04□□□□□ -0.96
RPA1-201ENST00000254719 OGNP20774 298 aaKnown RBP9.04□□□□□ -0.96
RPA1-201ENST00000254719 MZF1P28698 734 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms