RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 ZNF252P-AS1Q0IIN9 211 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 SYT16Q17RD7 645 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 KIAA1324Q6UXG2 1013 aaKnown RBP7.58□□□□□ -1.2
USP29-201ENST00000254181 PAMR1Q6UXH9 720 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 ZNF444Q8N0Y2 327 aaPredicted RBP7.58□□□□□ -1.2
USP29-201ENST00000254181 CYP4Z2PQ8N1L4 340 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 KRT78Q8N1N4 520 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 PACRGLQ8N7B6 248 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 MCUQ8NE86 351 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 NR4A3Q92570 626 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 LGALS12Q96DT0 336 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 CHFRQ96EP1 664 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 CENPNQ96H22 339 aaPredicted RBP7.58□□□□□ -1.2
USP29-201ENST00000254181 RNF145Q96MT1 663 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 RBM4BQ9BQ04 359 aaKnown RBP7.58□□□□□ -1.2
USP29-201ENST00000254181 FEM1AQ9BSK4 669 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 RBM4Q9BWF3 364 aaKnown RBP7.58□□□□□ -1.2
USP29-201ENST00000254181 GPR63Q9BZJ6 419 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.58□□□□□ -1.2
USP29-201ENST00000254181 EVA1AQ9H8M9 152 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 NSMCE4AQ9NXX6 385 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 DNMT3BQ9UBC3 853 aaKnown RBP7.58□□□□□ -1.2
USP29-201ENST00000254181 APEX2Q9UBZ4 518 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 UBQLN2Q9UHD9 624 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 PRAMEF22A3QJZ6 481 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 EFCAB10A6NFE3 127 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 AGAP5A6NIR3 686 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 KCNU1A8MYU2 1149 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 H0YAE9 185 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 MRASO14807 208 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 SSX4O60224 188 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 PRPSAP2O60256 369 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 SOAT2O75908 522 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 CHRNA1P02708 482 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 CD36P16671 472 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 ADORA2AP29274 412 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 HOXA1P49639 335 aaPredicted RBP7.58□□□□□ -1.2
USP29-201ENST00000254181 LIG4P49917 911 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 ACTR1AP61163 376 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 NOMO3P69849 1222 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 CSTF1Q05048 431 aaKnown RBP7.58□□□□□ -1.2
USP29-201ENST00000254181 LASP1Q14847 261 aaKnown RBP7.58□□□□□ -1.2
USP29-201ENST00000254181 NOMO1Q15155 1222 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 TRIP4Q15650 581 aaPredicted RBP7.58□□□□□ -1.2
USP29-201ENST00000254181 Q5BKY6 102 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 TTC23Q5W5X9 447 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 GLYATQ6IB77 296 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 PNCKQ6P2M8 343 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 GK5Q6ZS86 529 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 SLC16A13Q7RTY0 426 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 MIB1Q86YT6 1006 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 C10orf107Q8IVU9 208 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 LRRC17Q8N6Y2 441 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 GLIS1Q8NBF1 620 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 RDM1Q8NG50 284 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 LRRN4Q8WUT4 740 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 SLCO2A1Q92959 643 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 PKP4Q99569 1192 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 CLSTN3Q9BQT9 956 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 NTMT1Q9BV86 223 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 SPAG4Q9NPE6 437 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 PAK6Q9NQU5 681 aaPredicted RBP7.58□□□□□ -1.2
USP29-201ENST00000254181 FAM49BQ9NUQ9 324 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 MPP6Q9NZW5 540 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 EIF3KQ9UBQ5 218 aaKnown RBP7.58□□□□□ -1.2
USP29-201ENST00000254181 PEX16Q9Y5Y5 336 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 FAM205AQ6ZU69 1335 aa7.58□□□□□ -1.2
USP29-201ENST00000254181 SMAD7O15105 426 aaKnown RBP7.57□□□□□ -1.2
USP29-201ENST00000254181 SCAMP2O15127 329 aaKnown RBP7.57□□□□□ -1.2
USP29-201ENST00000254181 INPPL1O15357 1258 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 NDUFA2O43678 99 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 LILRB5O75023 590 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 CRTAPO75718 401 aaPredicted RBP7.57□□□□□ -1.2
USP29-201ENST00000254181 LDOC1O95751 146 aaPredicted RBP7.57□□□□□ -1.2
USP29-201ENST00000254181 ERVK-10P10266 1014 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 ATP6V1B2P21281 511 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 POLR2IP36954 125 aaKnown RBP7.57□□□□□ -1.2
USP29-201ENST00000254181 ETV4P43268 484 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 ZNF81P51508 661 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 GBX2P52951 348 aaPredicted RBP7.57□□□□□ -1.2
USP29-201ENST00000254181 SCN1BQ07699 218 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 DUSP4Q13115 394 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 SEC23AQ15436 765 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 MEP1AQ16819 746 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 UAP1L1Q3KQV9 507 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 SLC9B1Q4ZJI4 515 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 TXNDC11Q6PKC3 985 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 TFAP2DQ7Z6R9 452 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 MRPL10Q7Z7H8 261 aaKnown RBP7.57□□□□□ -1.2
USP29-201ENST00000254181 RBM23Q86U06 439 aaKnown RBP7.57□□□□□ -1.2
USP29-201ENST00000254181 C7orf31Q8N865 590 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 ZNF557Q8N988 423 aaPredicted RBP7.57□□□□□ -1.2
USP29-201ENST00000254181 C19orf18Q8NEA5 215 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 SRFBP1Q8NEF9 429 aaKnown RBP7.57□□□□□ -1.2
USP29-201ENST00000254181 TBCKQ8TEA7 893 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 AKT1S1Q96B36 256 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 ZNF669Q96BR6 464 aaPredicted RBP7.57□□□□□ -1.2
USP29-201ENST00000254181 NGLY1Q96IV0 654 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 NEDD4LQ96PU5 975 aa7.57□□□□□ -1.2
USP29-201ENST00000254181 SLC22A4Q9H015 551 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms