RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 B4E171 279 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 PGRMC1O00264 195 aaKnown RBP22.43■■□□□ 1.18
LSM4-201ENST00000252816 ZNF185O15231 689 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 CAPN5O15484 640 aaPredicted RBP22.43■■□□□ 1.18
LSM4-201ENST00000252816 SLC35G4P0C7Q5 338 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 TPSB2P20231 275 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 COILP38432 576 aaPredicted RBP22.43■■□□□ 1.18
LSM4-201ENST00000252816 TSPAN7P41732 249 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 TERF1P54274 439 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 ITIH4Q14624 930 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 TPSAB1Q15661 275 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 PCID2Q5JVF3 399 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 PACS1Q6VY07 963 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 OR6P1Q8NGX9 317 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 PEX13Q92968 403 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 CPNE5Q9HCH3 593 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 SLC39A1Q9NY26 324 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 SNX12Q9UMY4 172 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 PCDHGA3Q9Y5H0 932 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 B3GALT1Q9Y5Z6 326 aa22.43■■□□□ 1.18
LSM4-201ENST00000252816 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.42■■□□□ 1.18
LSM4-201ENST00000252816 OR1I1O60431 355 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 AP2A2O94973 939 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 KRT14P02533 472 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 NSG1P42857 185 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 PPP1CAP62136 330 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 GPS1Q13098 491 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 SEMA3AQ14563 771 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 TMEM164Q5U3C3 297 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 BROXQ5VW32 411 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 OR4L1Q8NH43 312 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 ACTRT1Q8TDG2 376 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 FCRL3Q96P31 734 aaPredicted RBP22.42■■□□□ 1.18
LSM4-201ENST00000252816 NAP1L3Q99457 506 aaPredicted RBP22.42■■□□□ 1.18
LSM4-201ENST00000252816 OR52A5Q9H2C5 316 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.42■■□□□ 1.18
LSM4-201ENST00000252816 NEU2Q9Y3R4 380 aa22.42■■□□□ 1.18
LSM4-201ENST00000252816 KIF1CO43896 1103 aaKnown RBP22.41■■□□□ 1.18
LSM4-201ENST00000252816 ANKRD34CP0C6C1 535 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 MGAT1P26572 445 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 PDHA2P29803 388 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 MAGEA6P43360 314 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 PREPP48147 710 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 NPY2RP49146 381 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 CXADRP78310 365 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 PRAMEP78395 509 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 CDK16Q00536 496 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 KCNJ11Q14654 390 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 ANKRD22Q5VYY1 191 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 LRRC8BQ6P9F7 803 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.41■■□□□ 1.18
LSM4-201ENST00000252816 SGSM3Q96HU1 749 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 DDA1Q9BW61 102 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 IL22Q9GZX6 179 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 VPS37BQ9H9H4 285 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 TREX1Q9NSU2 369 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 SYBUQ9NX95 663 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 BFARQ9NZS9 450 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 EPHA6Q9UF33 1036 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 PYCARDQ9ULZ3 195 aa22.41■■□□□ 1.18
LSM4-201ENST00000252816 PIKFYVEQ9Y2I7 2098 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 LIPCP11150 499 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 NMBRP28336 390 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 UCNP55089 124 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 TMPRSS3P57727 454 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 MC2RQ01718 297 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 SRSF6Q13247 344 aaKnown RBP22.4■■□□□ 1.18
LSM4-201ENST00000252816 GSE1Q14687 1217 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 PLCL1Q15111 1095 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 LYPLAL1Q5VWZ2 237 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 ANKS6Q68DC2 871 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 IRGCQ6NXR0 463 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 CCDC137Q6PK04 289 aaKnown RBP22.4■■□□□ 1.18
LSM4-201ENST00000252816 DTX1Q86Y01 620 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 RAB33BQ9H082 229 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 KIR3DX1Q9H7L2 352 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 SIDT1Q9NXL6 827 aaKnown RBP22.4■■□□□ 1.18
LSM4-201ENST00000252816 MARCH4Q9P2E8 410 aaPredicted RBP22.4■■□□□ 1.18
LSM4-201ENST00000252816 SLC24A2Q9UI40 661 aa22.4■■□□□ 1.18
LSM4-201ENST00000252816 AP3B1O00203 1094 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 CES2O00748 559 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 EFSO43281 561 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 CD82P27701 267 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 RPA4Q13156 261 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 FASTKD1Q53R41 847 aaKnown RBP22.39■■□□□ 1.17
LSM4-201ENST00000252816 CERS6Q6ZMG9 384 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 FAM92BQ6ZTR7 304 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 LDB1Q86U70 411 aaPredicted RBP22.39■■□□□ 1.17
LSM4-201ENST00000252816 ZFPM2Q8WW38 1151 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 CPT1BQ92523 772 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 CTRCQ99895 268 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 KIFC1Q9BW19 673 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 APMAPQ9HDC9 416 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 WDR70Q9NW82 654 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 SDK2Q58EX2 2172 aa22.39■■□□□ 1.17
LSM4-201ENST00000252816 CACNA1GO43497 2377 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.38■■□□□ 1.17
LSM4-201ENST00000252816 TOX3O15405 576 aaPredicted RBP22.38■■□□□ 1.17
LSM4-201ENST00000252816 PHF2O75151 1096 aa22.38■■□□□ 1.17
LSM4-201ENST00000252816 AVILO75366 819 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms