RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 TECRLQ5HYJ1 363 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 METTL2BQ6P1Q9 378 aaKnown RBP12.7□□□□□ -0.38
LSM8-201ENST00000249299 TTC23LQ6PF05 361 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 LVRNQ6Q4G3 990 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 CYHR1Q6ZMK1 362 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 Q6ZSR6 202 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 DET1Q7L5Y6 550 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 C11orf96Q7Z7L8 435 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 GALNT13Q8IUC8 556 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 RASGRP3Q8IV61 690 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 SLC22A9Q8IVM8 553 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 CPNE9Q8IYJ1 553 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 SLC22A15Q8IZD6 547 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 MAML2Q8IZL2 1156 aaPredicted RBP12.7□□□□□ -0.38
LSM8-201ENST00000249299 TMEM151AQ8N4L1 468 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 LKAAEAR1Q8TD35 194 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 EEF1AKMT1Q8WVE0 214 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 GAB3Q8WWW8 586 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 LINGO1Q96FE5 620 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 SLC30A3Q99726 388 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 SARS2Q9NP81 518 aaKnown RBP12.7□□□□□ -0.38
LSM8-201ENST00000249299 TRNAU1APQ9NX07 287 aaKnown RBP12.7□□□□□ -0.38
LSM8-201ENST00000249299 SIRPGQ9P1W8 387 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 SLC17A7Q9P2U7 560 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 COPG2Q9UBF2 871 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 EMCNQ9ULC0 261 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 CDYLQ9Y232 598 aa12.7□□□□□ -0.38
LSM8-201ENST00000249299 SPTY2D1-AS1A0A0U1RR47 76 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 PRSS38A1L453 326 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 PRR5-ARHGAP8B1AHC4 643 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 GFYI3L273 518 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 BPGMP07738 259 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 TPBGLP0DKB5 382 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 CPA3P15088 417 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 TFEBP19484 476 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 ATP5F1P24539 256 aaPredicted RBP12.69□□□□□ -0.38
LSM8-201ENST00000249299 SERPINB4P48594 390 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 PXNP49023 591 aaPredicted RBP12.69□□□□□ -0.38
LSM8-201ENST00000249299 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 DNAJB13P59910 316 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 CDKL1Q00532 357 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 PDK4Q16654 411 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 ACSBG2Q5FVE4 666 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 TMEM31Q5JXX7 168 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 METRNLQ641Q3 311 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 ZYG11AQ6WRX3 759 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 TRIM74Q86UV6 250 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 HOMEZQ8IX15 550 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 FAM160A2Q8N612 972 aaPredicted RBP12.69□□□□□ -0.38
LSM8-201ENST00000249299 TMEM105Q8N8V8 129 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 ANKRD42Q8N9B4 389 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 FBXO15Q8NCQ5 510 aaPredicted RBP12.69□□□□□ -0.38
LSM8-201ENST00000249299 C1orf216Q8TAB5 229 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 MDM1Q8TC05 714 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 CKAP2Q8WWK9 683 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 ASB11Q8WXH4 323 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 KLHDC7BQ96G42 594 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 MAGEB18Q96M61 343 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 FOPNLQ96NB1 174 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 SLC12A9Q9BXP2 914 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 COG4Q9H9E3 785 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 FZD3Q9NPG1 666 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 GALPQ9UBC7 116 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 GULP1Q9UBP9 304 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 ADAM21Q9UKJ8 722 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 TMEM98Q9Y2Y6 226 aa12.69□□□□□ -0.38
LSM8-201ENST00000249299 PLXND1Q9Y4D7 1925 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 A0A1W2PR77 199 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 TMEM202A6NGA9 273 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 PRR19A6NJB7 356 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 MEI4A8MW99 385 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 POLR3GO15318 223 aaPredicted RBP12.68□□□□□ -0.38
LSM8-201ENST00000249299 ZBTB14O43829 449 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 MATN4O95460 622 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 MYL2P10916 166 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 GRK2P25098 689 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 CD38P28907 300 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 HOXD12P35452 270 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 SERPINB5P36952 375 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 FNTBP49356 437 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 AP1S2P56377 157 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 CLDN2P57739 230 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 CSTF1Q05048 431 aaKnown RBP12.68□□□□□ -0.38
LSM8-201ENST00000249299 HSPA14Q0VDF9 509 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 SYTL3Q4VX76 610 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 ZNF648Q5T619 568 aaPredicted RBP12.68□□□□□ -0.38
LSM8-201ENST00000249299 WASH2PQ6VEQ5 465 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 SDR16C5Q8N3Y7 309 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 FRMD1Q8N878 549 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 CCDC63Q8NA47 563 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 ARMC2Q8NEN0 867 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 DYDC1Q8WWB3 177 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 ZC3H10Q96K80 434 aaKnown RBP12.68□□□□□ -0.38
LSM8-201ENST00000249299 SCYL1Q96KG9 808 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 OR2M4Q96R27 311 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 ATOH8Q96SQ7 321 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 CAPS2Q9BXY5 557 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 TRIM54Q9BYV2 358 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 ALG9Q9H6U8 611 aa12.68□□□□□ -0.38
LSM8-201ENST00000249299 WASH6PQ9NQA3 447 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms