RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 FAM83FQ8NEG4 500 aaPredicted RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 NARS2Q96I59 477 aaKnown RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 CTRCQ99895 268 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 ZNF556Q9HAH1 456 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 SNTG1Q9NSN8 517 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 IKZF3Q9UKT9 509 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 SNX6Q9UNH7 406 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 PCDHGA8Q9Y5G5 932 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 POU2F1P14859 743 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 HOXA11P31270 313 aaPredicted RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 SHMT2P34897 504 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 NAB1Q13506 487 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 ZNF235Q14590 738 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 ZMYND11Q15326 602 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 NOL9Q5SY16 702 aaKnown RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 ANKRD46Q86W74 232 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 ANKFN1Q8N957 763 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 MINDY2Q8NBR6 621 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 OR52J3Q8NH60 311 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 FRS2Q8WU20 508 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 JPH3Q8WXH2 748 aaPredicted RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 RPRD1AQ96P16 312 aaPredicted RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 C16orf70Q9BSU1 422 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 CLEC4MQ9H2X3 399 aaPredicted RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 ADAMTS10Q9H324 1103 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 MTMR10Q9NXD2 777 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 TAS2R9Q9NYW1 312 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 ACTR3BQ9P1U1 418 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 LOC100130705A0A1B0GUX0 176 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 FAM240BA0A1B0GVZ2 78 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 FAM172BPA6NC97 362 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 OR51F1A6NGY5 319 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 LRRC14BA6NHZ5 514 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 BTN3A1O00481 513 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 ANXA9O76027 345 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 WEE1P30291 646 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 CD86P42081 329 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 GRB7Q14451 532 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 TIFABQ6ZNK6 161 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 GPRIN1Q7Z2K8 1008 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 PACRGLQ8N7B6 248 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 KBTBD8Q8NFY9 601 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 SNAPC3Q92966 411 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 EXOC2Q96KP1 924 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 CNPPD1Q9BV87 410 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 EMILIN2Q9BXX0 1053 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 LATS2Q9NRM7 1088 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 KRT84Q9NSB2 600 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 INTS10Q9NVR2 710 aaKnown RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 PDP1Q9P0J1 537 aaPredicted RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 COL4A5P29400 1685 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 MAGEB16A2A368 324 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 UBXN8O00124 270 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 RASAL1O95294 804 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 LCKP06239 509 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 YES1P07947 543 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 PSKH1P11801 424 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 BMP2P12643 396 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 FSHRP23945 695 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 CD40LGP29965 261 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 PPP5CP53041 499 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 MAPKAPK3Q16644 382 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 RBM20Q5T481 1227 aaKnown RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 LUZP2Q86TE4 346 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 Q96MT0 163 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 MRPL9Q9BYD2 267 aaKnown RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 DPY30Q9C005 99 aa13.13□□□□□ -0.31
CCDC117-201ENST00000249064 DUS2Q9NX74 493 aaKnown RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 AAR2Q9Y312 384 aaKnown RBP13.13□□□□□ -0.31
CCDC117-201ENST00000249064 DPYSL4O14531 572 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 LRATO95237 230 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 HNRNPFP52597 415 aaKnown RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 FSCN1Q16658 493 aaKnown RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 DUSP28Q4G0W2 176 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 RNASE12Q5GAN4 147 aaKnown RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 FAM117BQ6P1L5 589 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 ZNF605Q86T29 641 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 TAC4Q86UU9 113 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 ELMOD1Q8N336 334 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 NATD1Q8N6N6 113 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 NPWQ8N729 165 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 SEPT5Q99719 369 aaPredicted RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 PAAF1Q9BRP4 392 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 TDRD1Q9BXT4 1180 aaKnown RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 PLSCR3Q9NRY6 295 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 CNOT11Q9UKZ1 510 aaKnown RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 MOXD2PA6NHM9 499 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 CHRNA1P02708 482 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 MT-ND2P03891 347 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 EFNA1P20827 205 aaPredicted RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 BTBD16Q32M84 506 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 FAM217AQ8IXS0 508 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 OR13J1Q8NGT2 312 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 DIRAS2Q96HU8 199 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 FCRL2Q96LA5 508 aaPredicted RBP13.12□□□□□ -0.31
CCDC117-201ENST00000249064 OR2B2Q9GZK3 357 aa13.12□□□□□ -0.31
CCDC117-201ENST00000249064 MMP28Q9H239 520 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms