RNA–Protein interactions for RNA: ENST00000239849.8

TNFSF11-201, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-201ENST00000239849 NDC1Q9BTX1 674 aa12.54□□□□□ -0.4
TNFSF11-201ENST00000239849 SPATA16Q9BXB7 569 aa12.54□□□□□ -0.4
TNFSF11-201ENST00000239849 MRM3Q9HC36 420 aaKnown RBP12.54□□□□□ -0.4
TNFSF11-201ENST00000239849 SLC6A20Q9NP91 592 aa12.54□□□□□ -0.4
TNFSF11-201ENST00000239849 C1orf232A0A0U1RR37 186 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 CCDC78A2IDD5 438 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 CCP110O43303 1012 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 CDK14O94921 469 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 RASAL1O95294 804 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 LCA5LO95447 670 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 ERCC2P18074 760 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 MMP13P45452 471 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 CDH6P55285 790 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 GTF2H3Q13889 308 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 RPE65Q16518 533 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 MAN2A1Q16706 1144 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 WDR59Q6PJI9 974 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 LINC00696Q6ZRV3 163 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 PGBD5Q8N414 524 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 N4BP2L2Q92802 583 aaPredicted RBP12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 GLYATL1Q969I3 302 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 TAAR6Q96RI8 345 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 ZNF559Q9BR84 538 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 C11orf70Q9BRQ4 267 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 NAA15Q9BXJ9 866 aaKnown RBP12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 COQ3Q9NZJ6 369 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 TRIM10Q9UDY6 481 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 AP4E1Q9UPM8 1137 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 FER1L5A0AVI2 2057 aa12.53□□□□□ -0.4
TNFSF11-201ENST00000239849 FAM171A2A8MVW0 826 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 MMEP08473 750 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 IL4RP24394 825 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 TNFSF10P50591 281 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 KPNA2P52292 529 aaKnown RBP12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 MAXP61244 160 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 XRCC4Q13426 336 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 TUBB8Q3ZCM7 444 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 RHBDD2Q6NTF9 364 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 MRPL14Q6P1L8 145 aaKnown RBP12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 NOP9Q86U38 636 aaKnown RBP12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 BEND7Q8N7W2 519 aaPredicted RBP12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 C3orf20Q8ND61 904 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 CATSPER1Q8NEC5 780 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 GPR150Q8NGU9 434 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 SUN3Q8TAQ9 357 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 ADAMTS18Q8TE60 1221 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 PHF10Q8WUB8 498 aaKnown RBP12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 THOC3Q96J01 351 aaKnown RBP12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 CNPY3Q9BT09 278 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 POLR1EQ9GZS1 481 aaKnown RBP12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 DHX35Q9H5Z1 703 aaKnown RBP12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 SIX2Q9NPC8 291 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 KCNN3Q9UGI6 736 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 CDC23Q9UJX2 597 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 WDR37Q9Y2I8 494 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 MEMO1Q9Y316 297 aa12.52□□□□□ -0.41
TNFSF11-201ENST00000239849 GSAPA4D1B5 854 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 OR6C74A6NCV1 312 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 SIGLEC16A6NMB1 481 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 CYP1A1P04798 512 aaPredicted RBP12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 CALB1P05937 261 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 UMODP07911 640 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 HLA-DPA1P20036 260 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 ITGAXP20702 1163 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 NSFP46459 744 aaKnown RBP12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 HCAR3P49019 387 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 DCDC1P59894 354 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 ITKQ08881 620 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 DMPKQ09013 629 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 C3AR1Q16581 482 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 AMZ2Q86W34 360 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 TRAPPC5Q8IUR0 188 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 ZNF547Q8IVP9 402 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 ATPAF2Q8N5M1 289 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 TRAM1L1Q8N609 369 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 NPWQ8N729 165 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 LRRN4CLQ8ND94 238 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 NUDT8Q8WV74 236 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 TTC25Q96NG3 672 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 XPO4Q9C0E2 1151 aaKnown RBP12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 NDST4Q9H3R1 872 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 ARFGAP3Q9NP61 516 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 CCM2LQ9NUG4 571 aaPredicted RBP12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 TXLNGQ9NUQ3 528 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 IMP3Q9NV31 184 aaKnown RBP12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 SEPT11Q9NVA2 429 aaKnown RBP12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 POMT2Q9UKY4 750 aa12.51□□□□□ -0.41
TNFSF11-201ENST00000239849 OR2B3O76000 313 aa12.5□□□□□ -0.41
TNFSF11-201ENST00000239849 USP1O94782 785 aa12.5□□□□□ -0.41
TNFSF11-201ENST00000239849 PEX11BO96011 259 aa12.5□□□□□ -0.41
TNFSF11-201ENST00000239849 CBSLP0DN79 551 aa12.5□□□□□ -0.41
TNFSF11-201ENST00000239849 PIM1P11309 404 aaPredicted RBP12.5□□□□□ -0.41
TNFSF11-201ENST00000239849 MTHFD1P11586 935 aaKnown RBP12.5□□□□□ -0.41
TNFSF11-201ENST00000239849 FDXRP22570 491 aa12.5□□□□□ -0.41
TNFSF11-201ENST00000239849 CBSP35520 551 aa12.5□□□□□ -0.41
TNFSF11-201ENST00000239849 MEOX1P50221 254 aa12.5□□□□□ -0.41
TNFSF11-201ENST00000239849 SYCP1Q15431 976 aa12.5□□□□□ -0.41
TNFSF11-201ENST00000239849 ZNF648Q5T619 568 aaPredicted RBP12.5□□□□□ -0.41
TNFSF11-201ENST00000239849 ERMARDQ5T6L9 678 aa12.5□□□□□ -0.41
TNFSF11-201ENST00000239849 BRSK1Q8TDC3 778 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms