RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 RALGDSQ12967 914 aa22.86■■□□□ 1.25
MSX2-201ENST00000239243 KCNC3Q14003 757 aa22.86■■□□□ 1.25
MSX2-201ENST00000239243 GBX1Q14549 363 aa22.86■■□□□ 1.25
MSX2-201ENST00000239243 HENMT1Q5T8I9 393 aaKnown RBP22.86■■□□□ 1.25
MSX2-201ENST00000239243 FAM219BQ5XKK7 198 aa22.86■■□□□ 1.25
MSX2-201ENST00000239243 DDHD1Q8NEL9 900 aa22.86■■□□□ 1.25
MSX2-201ENST00000239243 SCAMP4Q969E2 229 aa22.86■■□□□ 1.25
MSX2-201ENST00000239243 ROPN1LQ96C74 230 aa22.86■■□□□ 1.25
MSX2-201ENST00000239243 ABCG8Q9H221 673 aa22.86■■□□□ 1.25
MSX2-201ENST00000239243 MTG2Q9H4K7 406 aa22.86■■□□□ 1.25
MSX2-201ENST00000239243 CERS4Q9HA82 394 aa22.86■■□□□ 1.25
MSX2-201ENST00000239243 TRPV4Q9HBA0 871 aa22.86■■□□□ 1.25
MSX2-201ENST00000239243 FBP2O00757 339 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 OR7A17O14581 309 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 NVLO15381 856 aaKnown RBP22.85■■□□□ 1.25
MSX2-201ENST00000239243 PSMD8P48556 350 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 THOP1P52888 689 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 MUM1Q2TAK8 710 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 LETMD1Q6P1Q0 360 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 EFCAB3Q8N7B9 438 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 OR9I1Q8NGQ6 314 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 TSPEARQ8WU66 669 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 C2orf16Q68DN1 1984 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 PABPN1LA6NDY0 278 aaKnown RBP22.85■■□□□ 1.25
MSX2-201ENST00000239243 HEPACAM2A8MVW5 462 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 K7EPI3 171 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 CAPN1P07384 714 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 ELFN1P0C7U0 828 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 MSH3P20585 1137 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 ETV3P41162 512 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 CDKL1Q00532 357 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 SHHQ15465 462 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 TAF11Q15544 211 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 FUNDC1Q8IVP5 155 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 NRSN1Q8IZ57 195 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 TCAIMQ8N3R3 496 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 OR4F6Q8NGB9 312 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 VPS35Q96QK1 796 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 TMEM45AQ9NWC5 275 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 NDUFAF1Q9Y375 327 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 ST14Q9Y5Y6 855 aa22.85■■□□□ 1.25
MSX2-201ENST00000239243 PRRC2BQ5JSZ5 2229 aaKnown RBP22.84■■□□□ 1.25
MSX2-201ENST00000239243 EDDM13A0A1B0GTR0 161 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 KPNA3O00505 521 aaPredicted RBP22.84■■□□□ 1.25
MSX2-201ENST00000239243 FTH1P02794 183 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 ERVK-8P63133 956 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 SP140Q13342 867 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 C18orf21Q32NC0 220 aaPredicted RBP22.84■■□□□ 1.25
MSX2-201ENST00000239243 FNDC3BQ53EP0 1204 aaKnown RBP22.84■■□□□ 1.25
MSX2-201ENST00000239243 LDLRAP1Q5SW96 308 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 PARS2Q7L3T8 475 aaKnown RBP22.84■■□□□ 1.25
MSX2-201ENST00000239243 TECPR1Q7Z6L1 1165 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 MILR1Q7Z6M3 343 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 OR8D1Q8WZ84 308 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 DLG3Q92796 817 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 ZFYVE19Q96K21 471 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 FAM83CQ9BQN1 747 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 TMEM79Q9BSE2 394 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 AIG1Q9NVV5 245 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 GIMAP2Q9UG22 337 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 PCDHGA7Q9Y5G6 932 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 ATG2AQ2TAZ0 1938 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 H0Y858 1186 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 TRIM38O00635 465 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 SLC16A5O15375 505 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 HMOX2P30519 316 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 RPIAP49247 311 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 HSPA14Q0VDF9 509 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 TRAF3Q13114 568 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 CEACAM7Q14002 265 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 FLOT2Q14254 428 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 HNRNPA1L2Q32P51 320 aaKnown RBP22.84■■□□□ 1.25
MSX2-201ENST00000239243 ATP6AP1LQ52LC2 224 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 CMPK2Q5EBM0 449 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 COQ5Q5HYK3 327 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 RARS2Q5T160 578 aaKnown RBP22.84■■□□□ 1.25
MSX2-201ENST00000239243 NEK10Q6ZWH5 1172 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 GET4Q7L5D6 327 aaPredicted RBP22.84■■□□□ 1.25
MSX2-201ENST00000239243 DET1Q7L5Y6 550 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 ZNF366Q8N895 744 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 TMIEQ8NEW7 156 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 VN1R2Q8NFZ6 395 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 CDK15Q96Q40 435 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 ACOX2Q99424 681 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 RIOK2Q9BVS4 552 aaKnown RBP22.84■■□□□ 1.25
MSX2-201ENST00000239243 SPAG4Q9NPE6 437 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 GPR45Q9Y5Y3 372 aa22.84■■□□□ 1.25
MSX2-201ENST00000239243 PRRT4C9JH25 899 aa22.83■■□□□ 1.25
MSX2-201ENST00000239243 KATNA1O75449 491 aa22.83■■□□□ 1.25
MSX2-201ENST00000239243 HIST1H2AGP0C0S8 130 aaPredicted RBP22.83■■□□□ 1.25
MSX2-201ENST00000239243 HIST1H2ADP20671 130 aa22.83■■□□□ 1.25
MSX2-201ENST00000239243 DPP6P42658 865 aa22.83■■□□□ 1.25
MSX2-201ENST00000239243 LIPIQ6XZB0 460 aa22.83■■□□□ 1.25
MSX2-201ENST00000239243 KBTBD6Q86V97 674 aa22.83■■□□□ 1.25
MSX2-201ENST00000239243 NRG4Q8WWG1 115 aa22.83■■□□□ 1.25
MSX2-201ENST00000239243 DNAJC9Q8WXX5 260 aa22.83■■□□□ 1.25
MSX2-201ENST00000239243 PPP2R3CQ969Q6 453 aa22.83■■□□□ 1.25
MSX2-201ENST00000239243 NXPE3Q969Y0 559 aa22.83■■□□□ 1.25
MSX2-201ENST00000239243 HIST1H2AHQ96KK5 128 aa22.83■■□□□ 1.25
MSX2-201ENST00000239243 HIST1H2AJQ99878 128 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms