RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 FAM174BQ3ZCQ3 159 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 GTF2H2CQ6P1K8 395 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 DCAKDQ8WVC6 231 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 LRRC58Q96CX6 371 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 AIF1LQ9BQI0 150 aa8.12□□□□□ -1.11
APOB-201ENST00000233242 AGO1Q9UL18 857 aaKnown RBP8.12□□□□□ -1.11
APOB-201ENST00000233242 TSPAN3O60637 253 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 PRH1P02810 166 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 CD2P06729 351 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 CKBP12277 381 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 IL7P13232 177 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 FAM76BQ5HYJ3 339 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 ANKRD22Q5VYY1 191 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 ZNF615Q8N8J6 731 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 HJURPQ8NCD3 748 aaPredicted RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 ABT1Q9ULW3 272 aaKnown RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 FAM155BO75949 473 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 FMO3P31513 532 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 CD83Q01151 205 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 FBXO16Q8IX29 292 aaPredicted RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 SLC45A3Q96JT2 553 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 TSSK3Q96PN8 268 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 TFB2MQ9H5Q4 396 aaKnown RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 AGO3Q9H9G7 860 aaKnown RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 TMEM27Q9HBJ8 222 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 J3QRK9 145 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 RP2O75695 350 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 CSTF2P33240 577 aaKnown RBP eCLIP8.11□□□□□ -1.11
APOB-201ENST00000233242 RHEBQ15382 184 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 CTC1Q2NKJ3 1217 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 KIF18BQ86Y91 864 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 FBXL8Q96CD0 374 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 OSMRQ99650 979 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 ACTR6Q9GZN1 396 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 ELL3Q9HB65 397 aaPredicted RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 ZNF780BQ9Y6R6 833 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 H0YGN5 161 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 PLD2O14939 933 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 FAM171BQ6P995 826 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 PLPPR4Q7Z2D5 763 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 XYLT1Q86Y38 959 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 ZBTB2Q8N680 514 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 THRSPQ92748 146 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 IPPKQ9H8X2 491 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 INTS7Q9NVH2 962 aaKnown RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 COMMD3Q9UBI1 195 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 FKBP7Q9Y680 259 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 NFS1Q9Y697 457 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 M0R233 179 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 MAFO75444 373 aaPredicted RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 SAGP10523 405 aaPredicted RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 SEMA5AQ13591 1074 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 WSCD1Q658N2 575 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 SPG21Q9NZD8 308 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 PIP5K1BO14986 540 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 PER2O15055 1255 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 UPP2O95045 317 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 PRKAG1P54619 331 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 HEPACAMQ14CZ8 416 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 TGFBIQ15582 683 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 PTPN20Q4JDL3 420 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 ESRP1Q6NXG1 681 aaKnown RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 LHFPL3Q86UP9 236 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 RANBP3LQ86VV4 465 aaPredicted RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 NATD1Q8N6N6 113 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 GEMIN6Q8WXD5 167 aaKnown RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 CASTOR2A6NHX0 329 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 HPRP00739 348 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 GTF2A2P52657 109 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 TAF1CQ15572 869 aaPredicted RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 ARSHQ5FYA8 562 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 UBQLN2Q9UHD9 624 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 FBXO9Q9UK97 447 aaPredicted RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 MAGED1Q9Y5V3 778 aaPredicted RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 XKRYO14609 159 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 ZBTB26Q9HCK0 441 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 MT-ND1P03886 318 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 CD247P20963 164 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 ATP5C1P36542 298 aaKnown RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 MAGEA12P43365 314 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 EXOC2Q96KP1 924 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 ZNF285Q96NJ3 590 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 CPNE5Q9HCH3 593 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 CUEDC1Q9NWM3 386 aaPredicted RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 CEP170BQ9Y4F5 1589 aaPredicted RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 ESR1P03372 595 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 CKMT2P17540 419 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 CYP4X1Q8N118 509 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 OXR1Q8N573 874 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 TMBIM1Q969X1 311 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 KLHL5Q96PQ7 755 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 ZNHIT2Q9UHR6 403 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 ANXA3P12429 323 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 BDNFP23560 247 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 CSTF1Q05048 431 aaKnown RBP8.11□□□□□ -1.11
APOB-201ENST00000233242 SEMA3AQ14563 771 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 IDNKQ5T6J7 187 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 GPR153Q6NV75 609 aa8.11□□□□□ -1.11
APOB-201ENST00000233242 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.11□□□□□ -1.112e-7■■□□□ 13.5
APOB-201ENST00000233242 TBC1D17Q9HA65 648 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms