RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 NF1P21359 2839 aa11.28□□□□□ -0.6
FRG1-201ENST00000226798 CCDC88CQ9P219 2028 aa11.28□□□□□ -0.6
FRG1-201ENST00000226798 ZFHX3Q15911 3703 aa11.27□□□□□ -0.6
FRG1-201ENST00000226798 ZNF487B1APH4 448 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 ZNF185O15231 689 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 KRT86O43790 486 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 CBX6O95503 412 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 KLK3P07288 261 aaPredicted RBP11.27□□□□□ -0.61
FRG1-201ENST00000226798 MSL3P1P0C860 447 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 KDELR1P24390 212 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 CA5AP35218 305 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 KPNA2P52292 529 aaKnown RBP11.27□□□□□ -0.61
FRG1-201ENST00000226798 TYRO3Q06418 890 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 AP1B1Q10567 949 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 NR6A1Q15406 480 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 FILIP1LQ4L180 1135 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 LDLRAP1Q5SW96 308 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 TMTC4Q5T4D3 741 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 PRAMEF17Q5VTA0 474 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 SLC9A4Q6AI14 798 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 DUS1LQ6P1R4 473 aaKnown RBP11.27□□□□□ -0.61
FRG1-201ENST00000226798 TTC30BQ8N4P2 665 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 ZBTB2Q8N680 514 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 ZFPM2Q8WW38 1151 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 CPT1BQ92523 772 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 SNRNP40Q96DI7 357 aaKnown RBP11.27□□□□□ -0.61
FRG1-201ENST00000226798 PPM1MQ96MI6 270 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 TTC25Q96NG3 672 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 TLR10Q9BXR5 811 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 KIR3DX1Q9H7L2 352 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 PCMTD2Q9NV79 361 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 SLC24A2Q9UI40 661 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 HEY1Q9Y5J3 304 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 CFAP20Q9Y6A4 193 aaKnown RBP11.27□□□□□ -0.61
FRG1-201ENST00000226798 DNMT3AQ9Y6K1 912 aaPredicted RBP11.27□□□□□ -0.61
FRG1-201ENST00000226798 SETD2Q9BYW2 2564 aaPredicted RBP11.27□□□□□ -0.61
FRG1-201ENST00000226798 C2CD3Q4AC94 2353 aa11.27□□□□□ -0.61
FRG1-201ENST00000226798 CROCCQ5TZA2 2017 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 A0A1W2PQJ5 194 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 OR6C74A6NCV1 312 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 A6NL46 340 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 C3orf70A6NLC5 250 aaPredicted RBP11.26□□□□□ -0.61
FRG1-201ENST00000226798 OR2AG2A6NM03 316 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 GAPDHSO14556 408 aaPredicted RBP11.26□□□□□ -0.61
FRG1-201ENST00000226798 SERPING1P05155 500 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 SPAM1P38567 509 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 RRADP55042 308 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 XRCC4Q13426 336 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 ATP1A4Q13733 1029 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 NCF4Q15080 339 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 PDK1Q15118 436 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 NOMO1Q15155 1222 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 ANO6Q4KMQ2 910 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 ZRANB3Q5FWF4 1079 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 GPRC6AQ5T6X5 926 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 VWA5B1Q5TIE3 1220 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 ZDHHC20Q5W0Z9 365 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 ALKBH5Q6P6C2 394 aaKnown RBP11.26□□□□□ -0.61
FRG1-201ENST00000226798 FBXO38Q6PIJ6 1188 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 FAM151BQ6UXP7 276 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 VSIG1Q86XK7 387 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 SYTL1Q8IYJ3 562 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 IQCKQ8N0W5 287 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 INSM2Q96T92 566 aaPredicted RBP11.26□□□□□ -0.61
FRG1-201ENST00000226798 BARD1Q99728 777 aaKnown RBP11.26□□□□□ -0.61
FRG1-201ENST00000226798 TRABDQ9H4I3 376 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 FANCEQ9HB96 536 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 GLOD4Q9HC38 313 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 ASF1BQ9NVP2 202 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 SMOXQ9NWM0 555 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 SOHLH2Q9NX45 425 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 IL17CQ9P0M4 197 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 C5AR2Q9P296 337 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 MAP10Q9P2G4 905 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 POMT2Q9UKY4 750 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 SLC5A6Q9Y289 635 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 ANKRD12Q6UB98 2062 aa11.26□□□□□ -0.61
FRG1-201ENST00000226798 MDC1Q14676 2089 aaKnown RBP11.25□□□□□ -0.61
FRG1-201ENST00000226798 A0A0A6YYK5 440 aaPredicted RBP11.25□□□□□ -0.61
FRG1-201ENST00000226798 LOC285095A0A1B0GVY8 99 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 PPP1R12AO14974 1030 aaPredicted RBP11.25□□□□□ -0.61
FRG1-201ENST00000226798 UGT1A9O60656 530 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 PMPCBO75439 489 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 LCA5LO95447 670 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 UGT1A6P19224 532 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 UGT1A1P22309 533 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 UGT1A4P22310 534 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 TNFRSF8P28908 595 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 PBLDP30039 288 aaPredicted RBP11.25□□□□□ -0.61
FRG1-201ENST00000226798 ARCN1P48444 511 aaKnown RBP11.25□□□□□ -0.61
FRG1-201ENST00000226798 RAPSNQ13702 412 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 NR1I3Q14994 352 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 PLEKHN1Q494U1 663 aaPredicted RBP11.25□□□□□ -0.61
FRG1-201ENST00000226798 TEX44Q53QW1 395 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 CRB2Q5IJ48 1285 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 ZNF385CQ66K41 422 aaPredicted RBP11.25□□□□□ -0.61
FRG1-201ENST00000226798 CCDC70Q6NSX1 233 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 TMEM220Q6QAJ8 160 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 KDELC1Q6UW63 502 aa11.25□□□□□ -0.61
FRG1-201ENST00000226798 NPNTQ6UXI9 565 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms