RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 SPO11Q9Y5K1 396 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 DYTNA2CJ06 578 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 CES2O00748 559 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 RAD51BO15315 384 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 HTRA2O43464 458 aaPredicted RBP5.64□□□□□ -1.51
AFP-201ENST00000226359 BUB1BO60566 1050 aaPredicted RBP5.64□□□□□ -1.51
AFP-201ENST00000226359 HEXIM1O94992 359 aaKnown RBP5.64□□□□□ -1.51
AFP-201ENST00000226359 PGLSO95336 258 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 PRKCGP05129 697 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 GP1BAP07359 652 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 ACP1P24666 158 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 LSP1P33241 339 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 GRK3P35626 688 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 RGRP47804 291 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 NR2C2P49116 596 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 TAS2R40P59535 323 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 SRP54P61011 504 aaKnown RBP5.64□□□□□ -1.51
AFP-201ENST00000226359 MAXP61244 160 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 DYNLT1P63172 113 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 PHC1P78364 1004 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 IRF9Q00978 393 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 SEMA5AQ13591 1074 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 FGL2Q14314 439 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 SHBQ15464 509 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 ZNF542PQ5EBM4 170 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 HES3Q5TGS1 186 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 TXNRD3NBQ6F5E7 133 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 ENPP7Q6UWV6 458 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 LIPIQ6XZB0 460 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 CCNI2Q6ZMN8 369 aaPredicted RBP5.64□□□□□ -1.51
AFP-201ENST00000226359 ZNF765Q7L2R6 523 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 RD3Q7Z3Z2 195 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 SLCO6A1Q86UG4 719 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 MMGT1Q8N4V1 131 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 UBL4BQ8N7F7 174 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 PPM1NQ8N819 430 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 NOA1Q8NC60 698 aaKnown RBP5.64□□□□□ -1.51
AFP-201ENST00000226359 LPCAT1Q8NF37 534 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 OR56A4Q8NGH8 313 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 FAM71BQ8TC56 605 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 MAML1Q92585 1016 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 BMFQ96LC9 184 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 Q96M66 194 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 PPP1R2P1Q96PQ5 205 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 PLCD4Q9BRC7 762 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 BOCQ9BWV1 1114 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 JAM3Q9BX67 310 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 GSDMCQ9BYG8 508 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 QRSL1Q9H0R6 528 aaKnown RBP5.64□□□□□ -1.51
AFP-201ENST00000226359 ZMAT4Q9H898 229 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 ANKZF1Q9H8Y5 726 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 ARFGAP3Q9NP61 516 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 STOML1Q9UBI4 398 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 ZNF69Q9UC07 566 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 PACSIN2Q9UNF0 486 aaPredicted RBP5.64□□□□□ -1.51
AFP-201ENST00000226359 GPR34Q9UPC5 381 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 RAXQ9Y2V3 346 aa5.64□□□□□ -1.51
AFP-201ENST00000226359 CPED1A4D0V7 1026 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 CAPN8A6NHC0 703 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 HACD1B0YJ81 288 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 FAM47E-STBD1D6RA91 191 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 LMO7DNF2Z398 122 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 TMX2-CTNND1H3BSU7 103 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 ZNF561-AS1K7EIQ3 104 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 K7ESM1 405 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 ATP8B1O43520 1251 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 JCHAINP01591 159 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 AMY2AP04746 511 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 HOXC4P09017 264 aaPredicted RBP5.63□□□□□ -1.51
AFP-201ENST00000226359 CD48P09326 243 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 CKMT1AP12532 417 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 AMY2BP19961 511 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 AGXTP21549 392 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 COMTP21964 271 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 TEAD1P28347 426 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 GPR1P46091 355 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 ARSEP51690 589 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 HADHBP55084 474 aaKnown RBP5.63□□□□□ -1.51
AFP-201ENST00000226359 IFI35P80217 286 aaPredicted RBP5.63□□□□□ -1.51
AFP-201ENST00000226359 GBE1Q04446 702 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 PPIDQ08752 370 aaKnown RBP5.63□□□□□ -1.51
AFP-201ENST00000226359 ILF3Q12906 894 aaKnown RBP eCLIP5.63□□□□□ -1.51
AFP-201ENST00000226359 TRAF2Q12933 501 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 DNAJC3Q13217 504 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 KCNAB2Q13303 367 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 SMAD1Q15797 465 aaKnown RBP5.63□□□□□ -1.51
AFP-201ENST00000226359 CNGA3Q16281 694 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 KCTD19Q17RG1 926 aaPredicted RBP5.63□□□□□ -1.51
AFP-201ENST00000226359 WSCD2Q2TBF2 565 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 DEFB133Q30KQ1 61 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 KAZNQ674X7 775 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 ITPRIPL1Q6GPH6 555 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 EFL1Q7Z2Z2 1120 aaKnown RBP5.63□□□□□ -1.51
AFP-201ENST00000226359 ZNF572Q7Z3I7 529 aaPredicted RBP5.63□□□□□ -1.51
AFP-201ENST00000226359 TAF8Q7Z7C8 310 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 ZAR1Q86SH2 424 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 NT5DC3Q86UY8 548 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 CDKL3Q8IVW4 592 aaPredicted RBP5.63□□□□□ -1.51
AFP-201ENST00000226359 RCOR2Q8IZ40 523 aa5.63□□□□□ -1.51
AFP-201ENST00000226359 NRSN1Q8IZ57 195 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms