RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ABRAXAS2Q15018 415 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 SLC39A12Q504Y0 691 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 IL27RAQ6UWB1 636 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 DSG4Q86SJ6 1040 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 MSRB3Q8IXL7 192 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 PHACTR4Q8IZ21 702 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 CFAP52Q8N1V2 620 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 TTC9BQ8N6N2 239 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 RHBDF1Q96CC6 855 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 NRBF2Q96F24 287 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 AURKBQ96GD4 344 aaPredicted RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 CCDC138Q96M89 665 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 C17orf80Q9BSJ5 609 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 NUSAP1Q9BXS6 441 aaKnown RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 MROQ9BYG7 248 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 ATP13A3Q9H7F0 1226 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 ABI2Q9NYB9 513 aaPredicted RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 SLC25A37Q9NYZ2 338 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 MTRRQ9UBK8 725 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 ADGRE2Q9UHX3 823 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 TLR6Q9Y2C9 796 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 WDR37Q9Y2I8 494 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 PATJQ8NI35 1801 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 HTR3EA5X5Y0 456 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 LSM1O15116 133 aaKnown RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 B4GALT3O60512 393 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 SOAT2O75908 522 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 CHEK2O96017 543 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 CHRNA1P02708 482 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 UGT2B4P06133 528 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 HOXD12P35452 270 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 ZNF140P52738 457 aaPredicted RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 KIAA0040Q15053 153 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 PGS1Q32NB8 556 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 CTSL3PQ5NE16 218 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 TMEM236Q5W0B7 351 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 TXNDC11Q6PKC3 985 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 SLCO6A1Q86UG4 719 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 METTL23Q86XA0 190 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 SPATA2LQ8IUW3 424 aaPredicted RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 OR2T12Q8NG77 320 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 SERPINB11Q96P15 392 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 TRIB3Q96RU7 358 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 C1QTNF3Q9BXJ4 246 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 CCDC68Q9H2F9 335 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 SYTL2Q9HCH5 934 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 BPIFA1Q9NP55 256 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 SARS2Q9NP81 518 aaKnown RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 CD274Q9NZQ7 290 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 KIAA1522Q9P206 1035 aaPredicted RBP12.22□□□□□ -0.45
NUP88-201ENST00000225696 ZMYM5Q9UJ78 669 aa12.22□□□□□ -0.45
NUP88-201ENST00000225696 LAMA2P24043 3122 aaKnown RBP12.21□□□□□ -0.45
NUP88-201ENST00000225696 MYO16Q9Y6X6 1858 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 LOC100130705A0A1B0GUX0 176 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 STX16O14662 325 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 AQP9O43315 295 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 HS6ST1O60243 411 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 RAMP2O60895 175 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 B3GALT4O96024 378 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 C1QCP02747 245 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 CYP11A1P05108 521 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 FGF1P05230 155 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 OGNP20774 298 aaKnown RBP12.21□□□□□ -0.45
NUP88-201ENST00000225696 OR1E1P30953 314 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 RPL9P32969 192 aaKnown RBP12.21□□□□□ -0.45
NUP88-201ENST00000225696 VBP1P61758 197 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 TRIM32Q13049 653 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 CCL14Q16627 93 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 INAVAQ3KP66 663 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 C9orf131Q5VYM1 1079 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 NECAB2Q7Z6G3 386 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 GALNT5Q7Z7M9 940 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 ZNF548Q8NEK5 533 aaPredicted RBP12.21□□□□□ -0.45
NUP88-201ENST00000225696 PJA1Q8NG27 643 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 OR56A4Q8NGH8 313 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 METTL6Q8TCB7 284 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 CD200R1Q8TD46 325 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 FAR1Q8WVX9 515 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 LINGO1Q96FE5 620 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 MS4A4AQ96JQ5 239 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 NODALQ96S42 347 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 THUMPD3Q9BV44 507 aaKnown RBP12.21□□□□□ -0.45
NUP88-201ENST00000225696 POLR1EQ9GZS1 481 aaKnown RBP12.21□□□□□ -0.45
NUP88-201ENST00000225696 ACTR8Q9H981 624 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 HEBP1Q9NRV9 189 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 FARSBQ9NSD9 589 aaKnown RBP12.21□□□□□ -0.45
NUP88-201ENST00000225696 COMMD8Q9NX08 183 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 VNN3Q9NY84 501 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 ERVK-18Q9QC07 812 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 DNAJB9Q9UBS3 223 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 TMEFF2Q9UIK5 374 aaPredicted RBP12.21□□□□□ -0.45
NUP88-201ENST00000225696 GBF1Q92538 1859 aa12.21□□□□□ -0.45
NUP88-201ENST00000225696 IGLV3-10A0A075B6K4 115 aa12.2□□□□□ -0.46
NUP88-201ENST00000225696 MYADML2A6NDP7 307 aa12.2□□□□□ -0.46
NUP88-201ENST00000225696 ARVCFO00192 962 aa12.2□□□□□ -0.46
NUP88-201ENST00000225696 OR7A17O14581 309 aa12.2□□□□□ -0.46
NUP88-201ENST00000225696 GPR182O15218 404 aa12.2□□□□□ -0.46
NUP88-201ENST00000225696 NDUFS2O75306 463 aa12.2□□□□□ -0.46
NUP88-201ENST00000225696 NDUFS3O75489 264 aa12.2□□□□□ -0.46
NUP88-201ENST00000225696 MLYCDO95822 493 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms