RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 EQTNQ9NQ60 294 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 CCDC177Q9NQR7 707 aaPredicted RBP11.37□□□□□ -0.59
NOD1-201ENST00000222823 RASSF1Q9NS23 344 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 CMTM6Q9NX76 183 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 ERVW-1Q9UQF0 538 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 NBNO60934 754 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 TMCC2O75069 709 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 COL6A1P12109 1028 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 RCVRNP35243 200 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 KCNJ11Q14654 390 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 NDUFAF6Q330K2 333 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 HFE2Q6ZVN8 426 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 DNAJB7Q7Z6W7 309 aaPredicted RBP11.37□□□□□ -0.59
NOD1-201ENST00000222823 CBR4Q8N4T8 237 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 VANGL1Q8TAA9 524 aaPredicted RBP11.37□□□□□ -0.59
NOD1-201ENST00000222823 KCTD13Q8WZ19 329 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 DUS2Q9NX74 493 aaKnown RBP11.37□□□□□ -0.59
NOD1-201ENST00000222823 PCDHGA11Q9Y5H2 935 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 IGKV6D-21A0A0A0MT36 114 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 TYROBPO43914 113 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 CHRNGP07510 517 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 PCSK2P16519 638 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 GNAZP19086 355 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 IL12RB1P42701 662 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 HCAR3P49019 387 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 DGKGP49619 791 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 CLK3P49761 638 aaKnown RBP11.37□□□□□ -0.59
NOD1-201ENST00000222823 WNT7BP56706 349 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 TAS2R41P59536 307 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 REP15Q6BDI9 236 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 MSANTD2Q6P1R3 559 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 TMEM220Q6QAJ8 160 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 OLFML1Q6UWY5 402 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 GPR135Q8IZ08 494 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 PARP8Q8N3A8 854 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 POC5Q8NA72 575 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 FAM156AQ8NDB6 213 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 ZNF248Q8NDW4 579 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 EBF4Q9BQW3 602 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 CLEC4MQ9H2X3 399 aaPredicted RBP11.37□□□□□ -0.59
NOD1-201ENST00000222823 MAT2BQ9NZL9 334 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 TRPS1Q9UHF7 1281 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 SIX4Q9UIU6 781 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 ADAMTS5Q9UNA0 930 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 TEX264Q9Y6I9 313 aa11.37□□□□□ -0.59
NOD1-201ENST00000222823 OR51F1A6NGY5 319 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 H3BNH8 94 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 SNPHO15079 494 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 SCN2BO60939 215 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 SLC25A12O75746 678 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 CCNDBP1O95273 360 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 HLA-DQB2P05538 268 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 KCNE1P15382 129 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 CCR3P51677 355 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 ROR2Q01974 943 aaKnown RBP11.36□□□□□ -0.59
NOD1-201ENST00000222823 PPIGQ13427 754 aaKnown RBP eCLIP11.36□□□□□ -0.59
NOD1-201ENST00000222823 ANKRD46Q86W74 232 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 UNC5BQ8IZJ1 945 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 UBR7Q8N806 425 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 ARL10Q8N8L6 244 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 ROPN1LQ96C74 230 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 CDKN2AIPNLQ96HQ2 116 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 TCF25Q9BQ70 676 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 NUSAP1Q9BXS6 441 aaKnown RBP11.36□□□□□ -0.59
NOD1-201ENST00000222823 ABCB8Q9NUT2 735 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 C1orf109Q9NX04 203 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 PDP1Q9P0J1 537 aaPredicted RBP11.36□□□□□ -0.59
NOD1-201ENST00000222823 CNTN3Q9P232 1028 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 POMPQ9Y244 141 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 DNAJA2O60884 412 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 UGT2B17O75795 530 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 MAPK12P53778 367 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 PRMT2P55345 433 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 SRP54P61011 504 aaKnown RBP11.36□□□□□ -0.59
NOD1-201ENST00000222823 ATP13A5Q4VNC0 1218 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 FAM182AQ5T1J6 154 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 DDI2Q5TDH0 399 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 TPGS2Q68CL5 300 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 PAQR3Q6TCH7 311 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 GALNT5Q7Z7M9 940 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 GALNT13Q8IUC8 556 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 WDTC1Q8N5D0 677 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 SLC43A3Q8NBI5 491 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 PSMA8Q8TAA3 256 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 EXOSC8Q96B26 276 aaKnown RBP11.36□□□□□ -0.59
NOD1-201ENST00000222823 CENPNQ96H22 339 aaPredicted RBP11.36□□□□□ -0.59
NOD1-201ENST00000222823 HAPLN2Q9GZV7 340 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 EBF2Q9HAK2 575 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 PLGRKTQ9HBL7 147 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 GDAP2Q9NXN4 497 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 SMPD3Q9NY59 655 aaPredicted RBP11.36□□□□□ -0.59
NOD1-201ENST00000222823 MRPL39Q9NYK5 338 aaKnown RBP11.36□□□□□ -0.59
NOD1-201ENST00000222823 SLC17A6Q9P2U8 582 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 TELO2Q9Y4R8 837 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 ARL5AQ9Y689 179 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 LAMP2P13473 410 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 IGFBP5P24593 272 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 TLE2Q04725 743 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 GAD2Q05329 585 aa11.36□□□□□ -0.59
NOD1-201ENST00000222823 NR1D2Q14995 579 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms