RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 UGT3A1Q6NUS8 523 aa26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 FSTL5Q8N475 847 aaPredicted RBP26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 MINDY1Q8N5J2 469 aa26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 ANKRD7Q92527 254 aa26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 DHRS7Q9Y394 339 aa26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 TPP1O14773 563 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 STMN1P16949 149 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 DGKAP23743 735 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 DMPKQ09013 629 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 LRIG3Q6UXM1 1119 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 ASZ1Q8WWH4 475 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 TMEM159Q96B96 161 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 TSPAN17Q96FV3 270 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 TMEM109Q9BVC6 243 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 PARD6AQ9NPB6 346 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 SNX15Q9NRS6 342 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 EURLQ9NYK6 297 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 TDRD6O60522 2096 aaKnown RBP26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 DNAH14Q0VDD8 3507 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 KLHL33A6NCF5 533 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 PROB1E7EW31 1015 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 LIN7AO14910 233 aaPredicted RBP26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 KPNA5O15131 536 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 DFNA5O60443 496 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 ALDOAP04075 364 aaKnown RBP26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 RPL10P27635 214 aaKnown RBP26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 SERPINB8P50452 374 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 CCT8P50990 548 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 RAB10P61026 200 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 PAQR3Q6TCH7 311 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 RAPH1Q70E73 1250 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 GATAD2AQ86YP4 633 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 CPNE9Q8IYJ1 553 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 CYP4X1Q8N118 509 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 INPP5DQ92835 1189 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 RUFY1Q96T51 708 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 TAAR2Q9P1P5 351 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 PSMD13Q9UNM6 376 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 DOLKQ9UPQ8 538 aa26.72■■□□□ 1.87
CHMP4B-201ENST00000217402 SLC5A10A0PJK1 596 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 PRR19A6NJB7 356 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 PDZK1P1A8MUH7 402 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 KCNJ13O60928 360 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 CD9P21926 228 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 IDSP22304 550 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 PDHA2P29803 388 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 SKIV2L2P42285 1042 aaKnown RBP26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 RASA2Q15283 850 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 ZKSCAN8Q15776 578 aaPredicted RBP26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 TTLL9Q3SXZ7 439 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 METRNLQ641Q3 311 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 VRK3Q8IV63 474 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 RIBC1Q8N443 379 aaPredicted RBP26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 GPAMQ9HCL2 828 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 PRDM8Q9NQV8 689 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 LATS2Q9NRM7 1088 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 TBC1D29Q9UFV1 150 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 CDYLQ9Y232 598 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 RALGAPA1Q6GYQ0 2036 aa26.71■■□□□ 1.87
CHMP4B-201ENST00000217402 OTOGLQ3ZCN5 2332 aa26.7■■□□□ 1.87
CHMP4B-201ENST00000217402 FOXO6A8MYZ6 492 aa26.7■■□□□ 1.86
CHMP4B-201ENST00000217402 TYK2P29597 1187 aa26.7■■□□□ 1.86
CHMP4B-201ENST00000217402 DEFB133Q30KQ1 61 aa26.7■■□□□ 1.86
CHMP4B-201ENST00000217402 ACSBG2Q5FVE4 666 aa26.7■■□□□ 1.86
CHMP4B-201ENST00000217402 PLEKHS1Q5SXH7 462 aa26.7■■□□□ 1.86
CHMP4B-201ENST00000217402 GKN2Q86XP6 184 aa26.7■■□□□ 1.86
CHMP4B-201ENST00000217402 MTBPQ96DY7 904 aa26.7■■□□□ 1.86
CHMP4B-201ENST00000217402 CENPHQ9H3R5 247 aa26.7■■□□□ 1.86
CHMP4B-201ENST00000217402 WDR87Q6ZQQ6 2873 aa26.7■■□□□ 1.86
CHMP4B-201ENST00000217402 YKT6O15498 198 aa26.69■■□□□ 1.86
CHMP4B-201ENST00000217402 FFAR2O15552 330 aa26.69■■□□□ 1.86
CHMP4B-201ENST00000217402 GPC4O75487 556 aa26.69■■□□□ 1.86
CHMP4B-201ENST00000217402 KRT15P19012 456 aa26.69■■□□□ 1.86
CHMP4B-201ENST00000217402 GMPRP36959 345 aa26.69■■□□□ 1.86
CHMP4B-201ENST00000217402 CSRP2Q16527 193 aa26.69■■□□□ 1.86
CHMP4B-201ENST00000217402 TMEM207Q6UWW9 146 aa26.69■■□□□ 1.86
CHMP4B-201ENST00000217402 SLC25A45Q8N413 288 aa26.69■■□□□ 1.86
CHMP4B-201ENST00000217402 FAM46DQ8NEK8 389 aa26.69■■□□□ 1.86
CHMP4B-201ENST00000217402 SKA2Q8WVK7 121 aaPredicted RBP26.69■■□□□ 1.86
CHMP4B-201ENST00000217402 YY2O15391 372 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 LRP3O75074 770 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 EML2O95834 649 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 ZNF37AP17032 561 aaPredicted RBP26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 CLCNKAP51800 687 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 SPDYE1Q8NFV5 336 aaPredicted RBP26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 SAP25Q8TEE9 199 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 MZB1Q8WU39 189 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 GLMNQ92990 594 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 EDEM2Q9BV94 578 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 WWP1Q9H0M0 922 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 POPDC3Q9HBV1 291 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 RXFP3Q9NSD7 469 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 ZNF446Q9NWS9 450 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 KLHL42Q9P2K6 505 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 LGALS13Q9UHV8 139 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 ACSL5Q9ULC5 683 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 WDR37Q9Y2I8 494 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 LMO7DNF2Z398 122 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 ANXA6P08133 673 aa26.68■■□□□ 1.86
CHMP4B-201ENST00000217402 SLC35G4P0C7Q5 338 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms