RNA–Protein interactions for RNA: ENST00000216267.12

BRD1-201, Transcript of bromodomain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRD1, Length 4,614 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1-201ENST00000216267 HIPK3Q9H422 1215 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 TRNAU1APQ9NX07 287 aaKnown RBP13.09□□□□□ -0.31
BRD1-201ENST00000216267 GALPQ9UBC7 116 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 DUX4Q9UBX2 424 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 VPS51Q9UID3 782 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 SAGE2PA6NJ88 616 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 SLC9A3R1O14745 358 aaPredicted RBP13.09□□□□□ -0.31
BRD1-201ENST00000216267 PCDH8O95206 1070 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 EPOP01588 193 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 MAPK9P45984 424 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 TRIM32Q13049 653 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 DPY19L1Q2PZI1 675 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 LDLRAP1Q5SW96 308 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 ZNF614Q8N883 585 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 ZFP28Q8NHY6 868 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 C2orf15Q8WU43 125 aaKnown RBP13.09□□□□□ -0.31
BRD1-201ENST00000216267 TEFMQ96QE5 360 aaKnown RBP13.09□□□□□ -0.31
BRD1-201ENST00000216267 ARMC7Q9H6L4 198 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 SGK2Q9HBY8 427 aa13.09□□□□□ -0.31
BRD1-201ENST00000216267 FBRSL1Q9HCM7 1045 aaKnown RBP13.09□□□□□ -0.31
BRD1-201ENST00000216267 DENRO43583 198 aaKnown RBP13.08□□□□□ -0.31
BRD1-201ENST00000216267 AQP1P29972 269 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 IL12RB1P42701 662 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 CTSKP43235 329 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 STC1P52823 247 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 CCL23P55773 120 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 RAB14P61106 215 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 CCL14Q16627 93 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 MPPE1Q53F39 396 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 CTU1Q7Z7A3 348 aaKnown RBP13.08□□□□□ -0.31
BRD1-201ENST00000216267 NDEL1Q9GZM8 345 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 SERHL2Q9H4I8 314 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 POPDC3Q9HBV1 291 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 SERHLQ9NQF3 203 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 TMEM9Q9P0T7 183 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 DOLKQ9UPQ8 538 aa13.08□□□□□ -0.31
BRD1-201ENST00000216267 H0YJX3 145 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 OR10H3O60404 316 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 LEPRP48357 1165 aaKnown RBP13.08□□□□□ -0.32
BRD1-201ENST00000216267 TLR1Q15399 786 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 NPLOC4Q8TAT6 608 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 DEPDC7Q96QD5 511 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 ASAH2Q9NR71 780 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 SCML2Q9UQR0 700 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 SLC9A8Q9Y2E8 581 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 CAPN14A8MX76 684 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 ADAMDEC1O15204 470 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 SERPINB7O75635 380 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 TBX18O95935 607 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 NPPAP01160 153 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 NR4A1P22736 598 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 VARSP26640 1264 aaKnown RBP13.08□□□□□ -0.32
BRD1-201ENST00000216267 NSG1P42857 185 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 CSNK2BP67870 215 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 SRSF11Q05519 484 aaKnown RBP13.08□□□□□ -0.32
BRD1-201ENST00000216267 ARMC6Q6NXE6 501 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 BHLHB9Q6PI77 547 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 PTCHD4Q6ZW05 846 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 AHSA2Q719I0 299 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 KBTBD6Q86V97 674 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 FBXO27Q8NI29 283 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 UBASH3BQ8TF42 649 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 NACC2Q96BF6 587 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 SLC45A3Q96JT2 553 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.08□□□□□ -0.322e-6■■□□□ 14
BRD1-201ENST00000216267 COQ6Q9Y2Z9 468 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 A0A0U1RQF3 1178 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 TRIM43BA6NCK2 446 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 KRT87PA6NCN2 255 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 C9IYK1 514 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 RNASEH2AO75792 299 aaKnown RBP13.08□□□□□ -0.32
BRD1-201ENST00000216267 SERPINA1P01009 418 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 EIF2S1P05198 315 aaKnown RBP13.08□□□□□ -0.32
BRD1-201ENST00000216267 RFX3P48380 749 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 GJA9P57773 515 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 ECT2LQ008S8 904 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 CREMQ03060 361 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 TAZQ16635 292 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 ZNF57Q68EA5 555 aaPredicted RBP13.08□□□□□ -0.32
BRD1-201ENST00000216267 CAPN13Q6MZZ7 669 aaPredicted RBP13.08□□□□□ -0.32
BRD1-201ENST00000216267 RPS27LQ71UM5 84 aaKnown RBP13.08□□□□□ -0.32
BRD1-201ENST00000216267 ANKRD46Q86W74 232 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 SLX4Q8IY92 1834 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 TTC29Q8NA56 475 aaPredicted RBP13.08□□□□□ -0.32
BRD1-201ENST00000216267 PIK3C3Q8NEB9 887 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 DOCK2Q92608 1830 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 FAIM2Q9BWQ8 316 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 KAT8Q9H7Z6 458 aaKnown RBP13.08□□□□□ -0.32
BRD1-201ENST00000216267 RAB23Q9ULC3 237 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 OGDHLQ9ULD0 1010 aa13.08□□□□□ -0.32
BRD1-201ENST00000216267 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.08□□□□□ -0.32
BRD1-201ENST00000216267 STX16O14662 325 aa13.07□□□□□ -0.32
BRD1-201ENST00000216267 COL6A1P12109 1028 aa13.07□□□□□ -0.32
BRD1-201ENST00000216267 C4BPBP20851 252 aa13.07□□□□□ -0.32
BRD1-201ENST00000216267 CHIT1Q13231 466 aa13.07□□□□□ -0.32
BRD1-201ENST00000216267 GNA13Q14344 377 aa13.07□□□□□ -0.32
BRD1-201ENST00000216267 CHSY3Q70JA7 882 aa13.07□□□□□ -0.32
BRD1-201ENST00000216267 WDR36Q8NI36 951 aaKnown RBP13.07□□□□□ -0.32
BRD1-201ENST00000216267 PEX13Q92968 403 aa13.07□□□□□ -0.32
BRD1-201ENST00000216267 TMBIM1Q969X1 311 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms