RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 SPANXN4Q5MJ08 99 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 TTC23Q5W5X9 447 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 GPRIN3Q6ZVF9 776 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 ATG16L2Q8NAA4 619 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 LPCAT1Q8NF37 534 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 TSSK3Q96PN8 268 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 TRMOQ9BU70 441 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 TAS2R13Q9NYV9 303 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 GIT1Q9Y2X7 761 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 M0R129 80 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 SNPHO15079 494 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 TPD52L2O43399 206 aaKnown RBP16.51■□□□□ 0.23
CTDP1-201ENST00000075430 TMBIM6P55061 237 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 MAPKAPK3Q16644 382 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 METTL23Q86XA0 190 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 GPSM1Q86YR5 675 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 OR6K2Q8NGY2 324 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 MCFD2Q8NI22 146 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 GIPC2Q8TF65 315 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 STON2Q8WXE9 905 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 GDAP2Q9NXN4 497 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 KIF17Q9P2E2 1029 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 SLC1A7O00341 560 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 BCKDKO14874 412 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 TFECO14948 347 aaPredicted RBP16.51■□□□□ 0.23
CTDP1-201ENST00000075430 SEC22BO75396 215 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 SERPINA1P01009 418 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 ZNF24P17028 368 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 UBE2UQ5VVX9 321 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 SPATA2LQ8IUW3 424 aaPredicted RBP16.51■□□□□ 0.23
CTDP1-201ENST00000075430 HID1Q8IV36 788 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 CNTN4Q8IWV2 1026 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 ZHX1-C8orf76Q96EF9 292 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 TRIM54Q9BYV2 358 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 ASPSCR1Q9BZE9 553 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 PALMDQ9NP74 551 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 ABCD2Q9UBJ2 740 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 GTF2IRD1Q9UHL9 959 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 ZNF225Q9UK10 706 aa16.51■□□□□ 0.23
CTDP1-201ENST00000075430 TCRBV5S2A0A599 114 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 ZNF99A8MXY4 864 aaPredicted RBP16.5■□□□□ 0.23
CTDP1-201ENST00000075430 H0Y626 953 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 TRIM16O95361 564 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 C1QCP02747 245 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 ADRA1AP35348 466 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 GP2P55259 537 aaKnown RBP16.5■□□□□ 0.23
CTDP1-201ENST00000075430 CPSF6Q16630 551 aaKnown RBP eCLIP16.5■□□□□ 0.23
CTDP1-201ENST00000075430 TLR9Q9NR96 1032 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 TRMT6Q9UJA5 497 aaKnown RBP16.5■□□□□ 0.23
CTDP1-201ENST00000075430 NINQ8N4C6 2090 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 IRAK2O43187 625 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 UGT2B4P06133 528 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 PSMD8P48556 350 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 MRPS15P82914 257 aaKnown RBP16.5■□□□□ 0.23
CTDP1-201ENST00000075430 LETMD1Q6P1Q0 360 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 CYP20A1Q6UW02 462 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 TPD52L3Q96J77 140 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 SLC25A51Q9H1U9 297 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 MAGEE1Q9HCI5 957 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 FLRT1Q9NZU1 646 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 SPATA7Q9P0W8 599 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 MYO10Q9HD67 2058 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 KRT87PA6NCN2 255 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 SEC14L2O76054 403 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 MT-ND2P03891 347 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 RAP2AP10114 183 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 AZGP1P25311 298 aaKnown RBP16.5■□□□□ 0.23
CTDP1-201ENST00000075430 SLC39A12Q504Y0 691 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 P2RY8Q86VZ1 359 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 ALDH16A1Q8IZ83 802 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 OR7D4Q8NG98 312 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 FAM120BQ96EK7 910 aaKnown RBP16.5■□□□□ 0.23
CTDP1-201ENST00000075430 SYT17Q9BSW7 474 aa16.5■□□□□ 0.23
CTDP1-201ENST00000075430 MUSKO15146 869 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 RGS5O15539 181 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 WARSP23381 471 aaKnown RBP16.49■□□□□ 0.23
CTDP1-201ENST00000075430 CD52P31358 61 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 TWF1Q12792 350 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 SKIV2LQ15477 1246 aaKnown RBP16.49■□□□□ 0.23
CTDP1-201ENST00000075430 CRY1Q16526 586 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 USP50Q70EL3 339 aaPredicted RBP16.49■□□□□ 0.23
CTDP1-201ENST00000075430 RASAL3Q86YV0 1011 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 EID3Q8N140 333 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 CLDN19Q8N6F1 224 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 LINC01465Q8N7H1 131 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 CCDC97Q96F63 343 aaPredicted RBP16.49■□□□□ 0.23
CTDP1-201ENST00000075430 NACA2Q9H009 215 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 C14orf119Q9NWQ9 140 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 A0A0D9SEW6 157 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 SMIM35A0A1B0GVV1 85 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 PRMT5O14744 637 aaPredicted RBP16.49■□□□□ 0.23
CTDP1-201ENST00000075430 MLYCDO95822 493 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 SCNN1AP37088 669 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 ERVPABLB-1P60509 514 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 DDX39BQ13838 428 aaKnown RBP16.49■□□□□ 0.23
CTDP1-201ENST00000075430 DGUOKQ16854 277 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 PM20D1Q6GTS8 502 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 NEK10Q6ZWH5 1172 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 PHYKPLQ8IUZ5 450 aa16.49■□□□□ 0.23
CTDP1-201ENST00000075430 TOP6BLQ8N6T0 577 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms