RNA–Protein interactions for RNA: ENST00000057513.7

TNIP3-201, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP3, Length 2,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-201ENST00000057513 ZNF540Q8NDQ6 660 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 OR6F1Q8NGZ6 308 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 SLC39A8Q9C0K1 460 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 PRDM8Q9NQV8 689 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 ERAP1Q9NZ08 941 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 ORC6Q9Y5N6 252 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 SLC7A4O43246 635 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 HOXD8P13378 290 aaPredicted RBP13.5□□□□□ -0.25
TNIP3-201ENST00000057513 AKAP5P24588 427 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 GGT5P36269 586 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 CXCR3P49682 368 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 CLK1P49759 484 aaKnown RBP13.5□□□□□ -0.25
TNIP3-201ENST00000057513 SERPINH1P50454 418 aaKnown RBP13.5□□□□□ -0.25
TNIP3-201ENST00000057513 CXCL9Q07325 125 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 PLEKHG6Q3KR16 790 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 PRAMEF18Q5VWM3 479 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 ANKS6Q68DC2 871 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 ARMCX2Q7L311 632 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 ADHFE1Q8IWW8 467 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 MICU2Q8IYU8 434 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 NLGN4XQ8N0W4 816 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 FBXO39Q8N4B4 442 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 PARP16Q8N5Y8 322 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 DCBLD1Q8N8Z6 715 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 OR10A6Q8NH74 314 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 RHEBL1Q8TAI7 183 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 CCDC115Q96NT0 180 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 DDX28Q9NUL7 540 aaKnown RBP13.5□□□□□ -0.25
TNIP3-201ENST00000057513 NDFIP2Q9NV92 336 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 SCN3BQ9NY72 215 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 VAPAQ9P0L0 249 aa13.5□□□□□ -0.25
TNIP3-201ENST00000057513 MN1Q10571 1320 aaPredicted RBP13.49□□□□□ -0.25
TNIP3-201ENST00000057513 CLDN24A6NM45 220 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 KMOO15229 486 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 RGS10O43665 173 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 SSX4O60224 188 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 DFNA5O60443 496 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 PARNO95453 639 aaKnown RBP13.49□□□□□ -0.25
TNIP3-201ENST00000057513 PGK2P07205 417 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 FADDQ13158 208 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 GBX1Q14549 363 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 KCTD2Q14681 263 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 SYT16Q17RD7 645 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 ZC3H12BQ5HYM0 836 aaKnown RBP13.49□□□□□ -0.25
TNIP3-201ENST00000057513 PNCKQ6P2M8 343 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 AGMOQ6ZNB7 445 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 GATAD2AQ86YP4 633 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 ZNF548Q8NEK5 533 aaPredicted RBP13.49□□□□□ -0.25
TNIP3-201ENST00000057513 RNF34Q969K3 372 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 SLC10A4Q96EP9 437 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 SNX18Q96RF0 628 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 MFSD1Q9H3U5 465 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 RIBC2Q9H4K1 309 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 NEU3Q9UQ49 428 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 GINS2Q9Y248 185 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 KCTD3Q9Y597 815 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 NCF1BA6NI72 391 aaPredicted RBP13.49□□□□□ -0.25
TNIP3-201ENST00000057513 NCF1CA8MVU1 366 aaPredicted RBP13.49□□□□□ -0.25
TNIP3-201ENST00000057513 HAT1O14929 419 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 PGLSO95336 258 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 F9P00740 461 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 UROSP10746 265 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 DBTP11182 482 aaKnown RBP13.49□□□□□ -0.25
TNIP3-201ENST00000057513 ITGAMP11215 1152 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 NCF1P14598 390 aaPredicted RBP13.49□□□□□ -0.25
TNIP3-201ENST00000057513 AGTR2P50052 363 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 ZNF135P52742 658 aaPredicted RBP13.49□□□□□ -0.25
TNIP3-201ENST00000057513 IL1RL1Q01638 556 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 CHRNEQ04844 493 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 PWP1Q13610 501 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 RFX4Q33E94 735 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 DCAF4L1Q3SXM0 396 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 TPRG1LQ5T0D9 272 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 KDELC1Q6UW63 502 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 DET1Q7L5Y6 550 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 CYP4Z1Q86W10 505 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 AADATQ8N5Z0 425 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 SETD9Q8NE22 299 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 GIPC2Q8TF65 315 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 FAM162AQ96A26 154 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 ZNF560Q96MR9 790 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 TBCDQ9BTW9 1192 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 NXF3Q9H4D5 531 aaKnown RBP13.49□□□□□ -0.25
TNIP3-201ENST00000057513 QPCTLQ9NXS2 382 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 KLK14Q9P0G3 267 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 IKZF3Q9UKT9 509 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 RNF112Q9ULX5 631 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 UBQLN1Q9UMX0 589 aaKnown RBP13.49□□□□□ -0.25
TNIP3-201ENST00000057513 CARD8Q9Y2G2 431 aa13.49□□□□□ -0.25
TNIP3-201ENST00000057513 MCM3APO60318 1980 aa13.48□□□□□ -0.25
TNIP3-201ENST00000057513 OR2A25A4D2G3 310 aa13.48□□□□□ -0.25
TNIP3-201ENST00000057513 GRXCR2A6NFK2 248 aa13.48□□□□□ -0.25
TNIP3-201ENST00000057513 PDZK1P1A8MUH7 402 aa13.48□□□□□ -0.25
TNIP3-201ENST00000057513 ENPP3O14638 875 aa13.48□□□□□ -0.25
TNIP3-201ENST00000057513 RECQL4O94761 1208 aa13.48□□□□□ -0.25
TNIP3-201ENST00000057513 ALX3O95076 343 aa13.48□□□□□ -0.25
TNIP3-201ENST00000057513 TXNP10599 105 aaKnown RBP13.48□□□□□ -0.25
TNIP3-201ENST00000057513 IGFBP5P24593 272 aa13.48□□□□□ -0.25
TNIP3-201ENST00000057513 HOXA11P31270 313 aaPredicted RBP13.48□□□□□ -0.25
TNIP3-201ENST00000057513 ARL1P40616 181 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms