RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 XKR6Q5GH73 641 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.89□□□□□ -0.51
CHPF2-201ENST00000035307 PRR23CQ6ZRP0 262 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 ASRGL1Q7L266 308 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 MRPL43Q8N983 215 aaKnown RBP11.89□□□□□ -0.51
CHPF2-201ENST00000035307 VN1R3Q9BXE9 311 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 LIN28AQ9H9Z2 209 aaKnown RBP11.89□□□□□ -0.51
CHPF2-201ENST00000035307 MRGBPQ9NV56 204 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 BLOC1S6Q9UL45 172 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 SPO11Q9Y5K1 396 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 BACE2Q9Y5Z0 518 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 LINC01553A4QN01 128 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 ANKRD66B4E2M5 251 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 MATN2O00339 956 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 RGS5O15539 181 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 SLC7A4O43246 635 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 MAP3K13O43283 966 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 ZNF37AP17032 561 aaPredicted RBP11.89□□□□□ -0.51
CHPF2-201ENST00000035307 CRATP43155 626 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 MAGEA10P43363 369 aaPredicted RBP11.89□□□□□ -0.51
CHPF2-201ENST00000035307 LCP2Q13094 533 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 METTL21CQ5VZV1 264 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 GLYATQ6IB77 296 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 UBE2R2Q712K3 238 aaPredicted RBP11.89□□□□□ -0.51
CHPF2-201ENST00000035307 BEND7Q8N7W2 519 aaPredicted RBP11.89□□□□□ -0.51
CHPF2-201ENST00000035307 OR10A6Q8NH74 314 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 ANKRD49Q8WVL7 239 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 OSBPL6Q9BZF3 934 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 ZNF556Q9HAH1 456 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 MYOFQ9NZM1 2061 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 ZCWPW2A0A1B0GU75 182 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 ECI2O75521 394 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 MLYCDO95822 493 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 FAM163BP0C2L3 166 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 COL6A2P12110 1019 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 HOXC8P31273 242 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 LIN52Q52LA3 116 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 ERAP2Q6P179 960 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 AAGABQ6PD74 315 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 CHST15Q7LFX5 561 aaPredicted RBP11.89□□□□□ -0.51
CHPF2-201ENST00000035307 ADAMTSL2Q86TH1 951 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 OR14C36Q8NHC7 312 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 SHKBP1Q8TBC3 707 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 ANKRD27Q96NW4 1050 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 MTERF1Q99551 399 aaKnown RBP11.89□□□□□ -0.51
CHPF2-201ENST00000035307 RMND5AQ9H871 391 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 KCNK13Q9HB14 408 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 PLXNA1Q9UIW2 1896 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 VPS4AQ9UN37 437 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 CLCA2Q9UQC9 943 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 GLYATL1P3A0A0U1RQE8 302 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 ILVBLA1L0T0 632 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 RNASEH1O60930 286 aaKnown RBP11.88□□□□□ -0.51
CHPF2-201ENST00000035307 OR6B1O95007 311 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 CST1P01037 141 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 HCAR3P49019 387 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 TRIM25Q14258 630 aaKnown RBP11.88□□□□□ -0.51
CHPF2-201ENST00000035307 LAPTM4AQ15012 233 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 EPGNQ6UW88 154 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 ZNF513Q8N8E2 541 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-201ENST00000035307 DLG3Q92796 817 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 IRF7Q92985 503 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 PTCD3Q96EY7 689 aaKnown RBP11.88□□□□□ -0.51
CHPF2-201ENST00000035307 ZSWIM3Q96MP5 696 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 PANX1Q96RD7 426 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 C9orf16Q9BUW7 83 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 MIR1-1HGQ9H1L0 117 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 RASSF1Q9NS23 344 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 EXD2Q9NVH0 621 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 C6orf203Q9P0P8 240 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-201ENST00000035307 DNMT3BQ9UBC3 853 aaKnown RBP11.88□□□□□ -0.51
CHPF2-201ENST00000035307 ADH1CP00326 375 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 GSTM1P09488 218 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 ALOX15P16050 662 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-201ENST00000035307 HMGA1P17096 107 aaKnown RBP11.88□□□□□ -0.51
CHPF2-201ENST00000035307 CYP2A7P20853 494 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 DGKEP52429 567 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 CHRNA6Q15825 494 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 FAM174BQ3ZCQ3 159 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 TRAF7Q6Q0C0 670 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 TMEM135Q86UB9 458 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 RNF168Q8IYW5 571 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-201ENST00000035307 OSCP1Q8WVF1 389 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 SLC9A3R1O14745 358 aaPredicted RBP11.88□□□□□ -0.51
CHPF2-201ENST00000035307 KLF11O14901 512 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 CDK14O94921 469 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 KCNH1O95259 989 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 ACADMP11310 421 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 IDO1P14902 403 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 POLR2JP52435 117 aaKnown RBP11.88□□□□□ -0.51
CHPF2-201ENST00000035307 SLC16A1P53985 500 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 CDKN2DP55273 166 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 ATP6V0D1P61421 351 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 SCAPQ12770 1279 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 RFLNAQ6ZTI6 216 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 KIAA0408Q6ZU52 694 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 ZNF534Q76KX8 674 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 CILP2Q8IUL8 1156 aa11.88□□□□□ -0.51
CHPF2-201ENST00000035307 NSUN3Q9H649 340 aaKnown RBP11.88□□□□□ -0.51
CHPF2-201ENST00000035307 SCN3BQ9NY72 215 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms