RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 DNMT3AQ9Y6K1 912 aaPredicted RBP11.8□□□□□ -0.52
SYPL1-201ENST00000011473 C17orf113A0A1B0GUU1 675 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 PFDN6O15212 129 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 GLB1P16278 677 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 ALDH4A1P30038 563 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 SLC19A1P41440 591 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 MGAT5Q09328 741 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 EFTUD2Q15029 972 aaKnown RBP eCLIP11.79□□□□□ -0.52
SYPL1-201ENST00000011473 SYTL3Q4VX76 610 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 ABRAXAS1Q6UWZ7 409 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 MARCH9Q86YJ5 346 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 JPH3Q8WXH2 748 aaPredicted RBP11.79□□□□□ -0.52
SYPL1-201ENST00000011473 C12orf66Q96MD2 445 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 SLC30A3Q99726 388 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 FOXP3Q9BZS1 431 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 PHACTR1Q9C0D0 580 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 CDC42EP4Q9H3Q1 356 aaKnown RBP11.79□□□□□ -0.52
SYPL1-201ENST00000011473 SYNDIG1Q9H7V2 258 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 CPNE7Q9UBL6 633 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 RUVBL2Q9Y230 463 aaKnown RBP11.79□□□□□ -0.52
SYPL1-201ENST00000011473 MED16Q9Y2X0 877 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 FREM2Q5SZK8 3169 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 CELSR3Q9NYQ7 3312 aa11.79□□□□□ -0.52
SYPL1-201ENST00000011473 QSOX1O00391 747 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 ACSL3O95573 720 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 TOP3BO95985 862 aaKnown RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 ESR1P03372 595 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 SLC35G4P0C7Q5 338 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 PKMP14618 531 aaKnown RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 RPS3P23396 243 aaKnown RBP eCLIP11.78□□□□□ -0.522e-6■■■■■ 32.5
SYPL1-201ENST00000011473 LEPRP48357 1165 aaKnown RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 ADARP55265 1226 aaKnown RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 RPE65Q16518 533 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 KBTBD12Q3ZCT8 623 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 RBM20Q5T481 1227 aaKnown RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 OTOAQ7RTW8 1153 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 LMNTD2Q8IXW0 634 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 FBF1Q8TES7 1133 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 MRRFQ96E11 262 aaKnown RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 RMDN2Q96LZ7 410 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 INSM2Q96T92 566 aaPredicted RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 OR52A5Q9H2C5 316 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 NINJ2Q9NZG7 142 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 COL5A1P20908 1838 aaPredicted RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 CNOT1A5YKK6 2376 aaKnown RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 RHPN2P1A8MT19 583 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 E5RI56 91 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 NUDT21O43809 227 aaKnown RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 KCNJ13O60928 360 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 RFPL3O75679 317 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 C1QAP02745 245 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 HALP42357 657 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 DUSP3P51452 185 aaPredicted RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 OR1D5P58170 312 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 N4BP2L1Q5TBK1 243 aaPredicted RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 NKAIN2Q5VXU1 208 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 STRA8Q7Z7C7 330 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 PIM3Q86V86 326 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 LRRC6Q86X45 466 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 TRIM48Q8IWZ4 208 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 SIDT2Q8NBJ9 832 aaKnown RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 ACVR1CQ8NER5 493 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 UHMK1Q8TAS1 419 aaKnown RBP11.78□□□□□ -0.52
SYPL1-201ENST00000011473 TMEM159Q96B96 161 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 CXorf40BQ96DE9 158 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 NRTNQ99748 197 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 CCDC68Q9H2F9 335 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 RDH14Q9HBH5 336 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 NCKIPSDQ9NZQ3 722 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 ACSL5Q9ULC5 683 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 CDYLQ9Y232 598 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 VPS9D1Q9Y2B5 631 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 PCDHB1Q9Y5F3 818 aa11.78□□□□□ -0.52
SYPL1-201ENST00000011473 SPTBN2O15020 2390 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 KIR2DS5A0A0G2JLQ3 304 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 A0A0G2JNG1 304 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 SLC5A10A0PJK1 596 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 KIR2DS3K7RE56 304 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 FAM155BO75949 473 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 VIPP01282 170 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 SAT1P21673 171 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 AOAHP28039 575 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 FASLGP48023 281 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 UBE2IP63279 158 aaKnown RBP11.77□□□□□ -0.52
SYPL1-201ENST00000011473 KIR2DS5Q14953 304 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 ERCC6LQ2NKX8 1250 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 AMZ1Q400G9 498 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 AGAP9Q5VTM2 703 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 WASH2PQ6VEQ5 465 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 CTAGE3PQ8IX95 158 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 GPATCH11Q8N954 259 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 PHC3Q8NDX5 983 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 GIMAP7Q8NHV1 300 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 NAT6Q93015 286 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 PANX3Q96QZ0 392 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 TBC1D10AQ9BXI6 508 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 FAM129AQ9BZQ8 928 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 ABCG4Q9H172 646 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 WASH6PQ9NQA3 447 aa11.77□□□□□ -0.52
SYPL1-201ENST00000011473 APOBEC2Q9Y235 224 aaKnown RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms