RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Cog4Q8R1U1 785 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Olfr535Q8VGL3 312 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Tbrg4Q91YM4 630 aaKnown RBP9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Gpihbp1Q9D1N2 228 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Tmem81Q9D5K1 259 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 P2yr13Q9D8I2 337 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Tm9sf1Q9DBU0 606 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Cngb3Q9JJZ9 694 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Rasgrp2Q9QUG9 608 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 PrepQ9QUR6 710 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Cst9Q9Z0H6 137 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Ly6g6dQ9Z1Q3 135 aa9.77□□□□□ -0.84
Ccdc38-201ENSMUST00000092215 Phf11bB4XVQ1 276 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 FanceB8JJD6 213 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Gm4871D3Z0W7 314 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 FpgtG5E8F4 590 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Zfp871G5E905 615 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Srsf5O35326 269 aaKnown RBP9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 MutP16332 748 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Fpr1P33766 364 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Pnpla1Q3V1D5 599 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Slc9b2Q5BKR2 547 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Eps15l1Q60902 907 aaKnown RBP9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Mppe1Q80XL7 396 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cnpy4Q8BQ47 245 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Mrpl47Q8K2Y7 252 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Dync1li1Q8R1Q8 523 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 BniplQ99JU7 328 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Actrt2Q9D9L5 377 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Rrp8Q9DB85 457 aaKnown RBP9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Abhd1Q9QZC8 412 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Speer3W4VSP1 261 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Zfp40B1B1D3 796 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Olfr891E9Q843 316 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Gm1110F6Y113 635 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Ncam1P13595 1115 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Eno3P21550 434 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 WarsP32921 481 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Rpl36P47964 105 aaKnown RBP9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Slc8a1P70414 970 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Irx2P81066 474 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 G3bp2P97379 482 aaKnown RBP9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 H2-M3Q31093 336 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Sec24aQ3U2P1 1090 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Glb1l2Q3UPY5 636 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Sf1Q64213 653 aaKnown RBP9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Ccdc116Q80X53 541 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cep68Q8C0D9 733 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Stk-ps2Q8C0V7 499 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Zfp57Q8C6P8 421 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Pcyt2Q922E4 404 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Ndufab1Q9CR21 156 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Klc4Q9DBS5 619 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Chrac1Q9JKP8 129 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Spag6Q9JLI7 507 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Kcne5Q9QZ26 143 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cdh13Q9WTR5 714 aa9.77□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Tmem236A2ARJ3 344 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Mkrn2osD3Z393 217 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Scd1P13516 355 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Kcnc1P15388 511 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Mthfd2P18155 350 aaKnown RBP9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Ap1g1P22892 822 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Kif5aP33175 1027 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Serpinb5P70124 375 aaKnown RBP9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Gpr149Q3UVY1 732 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Akt2Q60823 481 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Zic5Q7TQ40 622 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Olfr1418Q7TQS3 318 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Prpf38bQ80SY5 542 aaKnown RBP9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 C2cd2lQ80X80 706 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Trmt12Q8BG71 446 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Chrnb3Q8BMN3 464 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Mettl22Q8R1C6 393 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Q9CPS8 106 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Cyp2u1Q9CX98 530 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Mdm1Q9D067 708 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Psmg2Q9EST4 264 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Orc3Q9JK30 715 aaKnown RBP9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Rnf4Q9QZS2 194 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Atp6ap1Q9R1Q9 463 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 UxtQ9WTZ0 157 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Nipsnap3aB1AWZ3 247 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Apol11bE9PUZ0 337 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 3110082J24RikF6Z6Z2 108 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Olfr596F8VQ26 312 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Serpinb6eI7HJI3 429 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Kpna4O35343 521 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Hnrnpa2b1O88569 353 aaKnown RBP9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Dab2P98078 766 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 G6pdxQ00612 515 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Fut10Q5F2L2 481 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Six3Q62233 333 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Ino80dQ66JY2 873 aaKnown RBP9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Klf8Q8BLM0 355 aaKnown RBP9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Ipo13Q8K0C1 963 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Epsti1Q8VDI1 314 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Olfr1469Q8VFW5 309 aa9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 PpanQ91YU8 470 aaKnown RBP9.76□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Homer3Q99JP6 356 aa9.76□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms