RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Shank2Q80Z38 1476 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm42372A0A1B0GT27 204 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 C87414E9PWI7 475 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm16494E9Q2Z4 87 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Dpep1P31428 410 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Rplp2P99027 115 aaKnown RBP13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Slc6a3Q61327 619 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 MslnQ61468 625 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Ndrg1Q62433 394 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Mgat5bQ765H6 792 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Efcab3Q80X60 432 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Fbxl4Q8BH70 621 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Map2k7Q8CE90 535 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Zdhhc6Q9CPV7 413 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Akr1e2Q9DCT1 301 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Cyp2b23E9Q593 491 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Neurod4O09105 330 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Slc22a23Q3UHH2 689 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Fbxw21Q8BI38 468 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Tmem72Q8C3K5 275 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 AA792892Q8C6S1 278 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Ca9Q8VHB5 437 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Slc3a1Q91WV7 685 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Tmem80Q9D3H0 123 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Ttc25Q9D4B2 624 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Clec2gQ9D676 269 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Arap3Q8R5G7 1538 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Ric1Q69ZJ7 1422 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm7929A0A286YDV3 213 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 1700064H15RikD3Z4D4 81 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm21977F6U3N7 213 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm8247F6VRJ8 213 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm8005F6YKY3 213 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm3015F6ZAP6 213 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm8212F6ZMY5 213 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm7954F7BAX1 213 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm8138F7BY56 213 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm8232F7CFJ3 213 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm17079F7D8Y4 213 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm8094K7N6U8 211 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm8165L7N218 213 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm8122L7N2C7 213 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Vmn2r2L7N2E9 908 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm17078M0QW51 211 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Mid1O70583 680 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Hoxc6P10629 235 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Ikzf2P81183 526 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Srbd1Q497V5 1015 aaKnown RBP13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 CcncQ62447 283 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gpalpp1Q69ZC8 346 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Glt28d2Q8BML3 165 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Usp45Q8K387 813 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Nle1Q8VEJ4 485 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Olfr1487Q8VFQ6 315 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Olfr385Q8VGT1 312 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Rbm47Q91WT8 590 aaKnown RBP13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 4931417E11RikQ9CR05 305 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Zbed3Q9D0L1 228 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Noa1Q9JJG9 693 aaKnown RBP13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Elf4Q9Z2U4 655 aa13.82□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gucy2dA0A0U1RPR8 1117 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Pgm2A2CEK3 580 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm8857L7N291 182 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Scarf2P59222 833 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 GscQ02591 256 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Chsy3Q5DTK1 884 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 StyxQ60969 223 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 FaddQ61160 205 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Ints7Q7TQK1 966 aaKnown RBP13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Serpinb9dQ8BMT0 377 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Smad3Q8BUN5 425 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gpr21Q8BX79 349 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Mterf3Q8R3J4 412 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Grk5Q8VEB1 590 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Dlg2Q91XM9 852 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Tmem246Q91YV9 403 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 GmfbQ9CQI3 142 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 PolhQ9JJN0 694 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Arhgap36B1AUC7 590 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Adgrf2E9Q4J9 644 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Vmn2r51L7N215 852 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Ebf2O08792 575 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 SqleP52019 572 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Pcbp1P60335 356 aaKnown RBP13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Fbxo40P62932 710 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Irf3P70671 419 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 TdrpQ8C5P7 182 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Q8CDN1 933 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Tmem17Q8K0U3 198 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Polr1eQ8K202 482 aaKnown RBP13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Ebna1bp2Q9D903 306 aaKnown RBP13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Aif1lQ9EQX4 150 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Il21Q9ES17 146 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Smarcb1Q9Z0H3 385 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Cps1Q8C196 1500 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Gm8229K7N749 213 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 Tcf3P15806 651 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 PtpraP18052 829 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 PenkP22005 268 aa13.81□□□□□ -0.2
Col3a1-201ENSMUST00000087883 IspdQ5RJG7 447 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms