RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 E2f3O35261 457 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Cd4P06332 457 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 MndaP0DOV1 425 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Mpzl3Q3V3F6 237 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Fam169aQ5XG69 665 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Cypt2Q6P924 180 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Elmod2Q8BGF6 293 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Rcn3Q8BH97 328 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Cbx7Q8VDS3 158 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Chid1Q922Q9 393 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Me2Q99KE1 589 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Tcam1Q99NB3 548 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 4930553M12RikQ9CUH1 165 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 TesclQ9DAJ7 231 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Oxct2bQ9ESL0 520 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Fezf2Q9ESP5 455 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Lgr4A2ARI4 951 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Rad21l1A2AU37 552 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Gm5930D3Z257 264 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Prdm14E9Q3T6 561 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Vmn2r86G5E8Y4 848 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ikzf3O08900 507 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Nrp2O35375 931 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Slc6a20bO88575 635 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Pou4f1P17208 421 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ptpn6P29351 595 aaKnown RBP16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ankrd34bQ3UUF8 508 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 AtminQ6P9S1 818 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Rap2aQ80ZJ1 183 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Q810N5 247 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Lig4Q8BTF7 911 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Lrch3Q8BVU0 778 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Arel1Q8CHG5 823 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Irak4Q8R4K2 459 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Slc6a20aQ8VDB9 592 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Twf1Q91YR1 350 aaKnown RBP16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Fuca1Q99LJ1 452 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Arhgap8Q9CXP4 425 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 2610042L04RikQ9D073 150 aa16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 VapaQ9WV55 249 aaKnown RBP16.64■□□□□ 0.25
Ctcf-201ENSMUST00000005841 JchainP01592 159 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Erp29P57759 262 aaKnown RBP16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 TekQ02858 1122 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Lrrc14bQ3UJB3 510 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Pnpla1Q3V1D5 599 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Gpr21Q8BX79 349 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 4933409G03RikQ8C5U0 320 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Il23rQ8K4B4 644 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ubxn2aQ99KJ0 258 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Gins4Q99LZ3 223 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 PgdQ9DCD0 483 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 H2afb2S4R1M3 115 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Olfr543E9PWI5 336 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Cyp2j8G3UZ38 503 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Smim18J3QNP2 93 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Hk2O08528 917 aaKnown RBP16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Stam2O88811 523 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Prf1P10820 554 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ap2a2P17427 938 aaKnown RBP16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 F2P19221 618 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Fut4Q11127 433 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Magee1Q6PCZ4 918 aaKnown RBP16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Olfr212Q7TS33 327 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Prdm8Q8BZ97 687 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Prr33Q8C494 260 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 GabrpQ8QZW7 440 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Lsm1Q8VC85 133 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Scd3Q99PL7 359 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Psma4Q9R1P0 261 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Olfr287E9PZS7 322 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Dsg3O35902 993 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Tpst1O70281 370 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Clk1P22518 483 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Cct7P80313 544 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 SelpQ01102 768 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Pan3Q640Q5 837 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Depdc7Q91WS7 511 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Abcb8Q9CXJ4 717 aa16.63■□□□□ 0.25
Ctcf-201ENSMUST00000005841 L3mbtl1A2A5N8 826 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Rnf165E9QAU8 347 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Alox5P48999 674 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Mc4rP56450 332 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 MtpnP62774 118 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 AurkaP97477 395 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 BcheQ03311 603 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 LcorlQ3U285 600 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Oog3Q3UWY1 500 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Clec12aQ504P2 267 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Sema3cQ62181 751 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Tmcc2Q80W04 706 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ckap4Q8BMK4 575 aaKnown RBP16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 MaobQ8BW75 520 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Nox1Q8CIZ9 591 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Olfr850Q8VFF2 315 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Olfr308Q8VFP2 308 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 MlycdQ99J39 492 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Ccdc77Q9CZH8 489 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Tmprss6Q9DBI0 811 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Rcan2Q9JHG2 197 aa16.62■□□□□ 0.25
Ctcf-201ENSMUST00000005841 Pcdh15Q99PJ1 1943 aa16.62■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms