RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	PLXDC1	Q8IUK5	500 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	PIANP	Q8IYJ0	282 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	OR13J1	Q8NGT2	312 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	USP7	Q93009	1102 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	MS4A14	Q96JA4	679 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	PDLIM2	Q96JY6	352 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	NAP1L3	Q99457	506 aa	Predicted RBP	14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	TRMT1	Q9NXH9	659 aa	Known RBP	14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	OGFR	Q9NZT2	677 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	TTC7A	Q9ULT0	858 aa	Predicted RBP	14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	CACNA1G	O43497	2377 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	SMG1	Q96Q15	3661 aa	Known RBP	14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	C17orf113	A0A1B0GUU1	675 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	CCDC162P	A2VCL2	907 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	KLK10	O43240	276 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	KIF5C	O60282	957 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	PRAMEF10	O60809	474 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	FGF3	P11487	239 aa	Predicted RBP	14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	CCL4	P13236	92 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	AMD1	P17707	334 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	GPR18	Q14330	331 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	DBN1	Q16643	649 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	TSTD2	Q5T7W7	516 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	BROX	Q5VW32	411 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	XKR5	Q6UX68	686 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	NLRP9	Q7RTR0	991 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	ARHGAP22	Q7Z5H3	698 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	PDZD3	Q86UT5	571 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	CFAP206	Q8IYR0	622 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	PPHLN1	Q8NEY8	458 aa	Known RBP	14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	HM13	Q8TCT9	377 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	CRELD1	Q96HD1	420 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	B3GNT4	Q9C0J1	378 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	WWP1	Q9H0M0	922 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	VPS37B	Q9H9H4	285 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	FAM8A1	Q9UBU6	413 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	SLC2A6	Q9UGQ3	507 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	ACSL6	Q9UKU0	697 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	TCAF1	Q9Y4C2	921 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	MGA	Q8IWI9	3026 aa		14.72	□□□□□ -0.05
PHGDH-231	ENST00000641939	MN1	Q10571	1320 aa	Predicted RBP	14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	LOC400499	M0QZD8	3231 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	OR51F1	A6NGY5	319 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939		A8MU76	341 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	C9orf172	C9J069	976 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	AP3B1	O00203	1094 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	PGRMC1	O00264	195 aa	Known RBP	14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	AP2A2	O94973	939 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	GOT2	P00505	430 aa	Known RBP	14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	SLC35G4	P0C7Q5	338 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	MTHFD1	P11586	935 aa	Known RBP	14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	TYRP1	P17643	537 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	FOXN2	P32314	431 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	NSG1	P42857	185 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	SESN2	P58004	480 aa	Predicted RBP	14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	CDK16	Q00536	496 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	ACVR1	Q04771	509 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	ITIH4	Q14624	930 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	TMEM164	Q5U3C3	297 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	AFTPH	Q6ULP2	937 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	GPR150	Q8NGU9	434 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	PEX13	Q92968	403 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	HDAC10	Q969S8	669 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	MAGOHB	Q96A72	148 aa	Known RBP	14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	ZNF778	Q96MU6	729 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	OSBPL9	Q96SU4	736 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	INSM2	Q96T92	566 aa	Predicted RBP	14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	CCM2	Q9BSQ5	444 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	AP1M1	Q9BXS5	423 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	IMP3	Q9NV31	184 aa	Known RBP	14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	SMARCAL1	Q9NZC9	954 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	FOXJ2	Q9P0K8	574 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	KLHL3	Q9UH77	587 aa		14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	RALY	Q9UKM9	306 aa	Known RBP	14.71	□□□□□ -0.05
PHGDH-231	ENST00000641939	EFCAB7	A8K855	629 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939		B4E171	279 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	C9	P02748	559 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	POLB	P06746	335 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	GSTM1	P09488	218 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	TPSB2	P20231	275 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	TSPAN7	P41732	249 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	CAPZB	P47756	277 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	NPY2R	P49146	381 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	UCN	P55089	124 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	GFER	P55789	205 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	PRAME	P78395	509 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	GSTM4	Q03013	218 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	CLN3	Q13286	438 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	TRIP13	Q15645	432 aa	Predicted RBP	14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	TPSAB1	Q15661	275 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	CYP1B1	Q16678	543 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	PCID2	Q5JVF3	399 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	TTC27	Q6P3X3	843 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	PACS1	Q6VY07	963 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	FAM129C	Q86XR2	697 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	LILRA3	Q8N6C8	439 aa	Predicted RBP	14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	CLDN19	Q8N6F1	224 aa		14.7	□□□□□ -0.06
PHGDH-231	ENST00000641939	OR6P1	Q8NGX9	317 aa		14.7	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms