RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 DPTQ07507 201 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 ZNF844Q08AG5 666 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 CTBP1Q13363 440 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 UBAP2LQ14157 1087 aaKnown RBP9.28□□□□□ -0.92
PHGDH-228ENST00000641847 LRRC14Q15048 493 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 AGERQ15109 404 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 IRF4Q15306 451 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 TYSND1Q2T9J0 566 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 WSCD2Q2TBF2 565 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 GPR33Q49SQ1 333 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 C4orf17Q53FE4 359 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 CEP85LQ5SZL2 805 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 KIAA1614Q5VZ46 1190 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 KIAA0408Q6ZU52 694 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 TAS2R42Q7RTR8 314 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 SDCCAG8Q86SQ7 713 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-228ENST00000641847 LDB1Q86U70 411 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-228ENST00000641847 SLC26A11Q86WA9 606 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 LRRC6Q86X45 466 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 PIANPQ8IYJ0 282 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 IQCKQ8N0W5 287 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 PELI3Q8N2H9 469 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 NXPE1Q8N323 547 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 TP53I13Q8NBR0 393 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-228ENST00000641847 ZNF398Q8TD17 642 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 DTX3LQ8TDB6 740 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 SLC44A1Q8WWI5 657 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 ASB12Q8WXK4 309 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 ZBTB9Q96C00 473 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 ULK4Q96C45 1275 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 SLC6A18Q96N87 628 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 CPNE1Q99829 537 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 MYOCQ99972 504 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 DHRS4Q9BTZ2 278 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 VIPAS39Q9H9C1 493 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 FBXO6Q9NRD1 293 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-228ENST00000641847 INTS10Q9NVR2 710 aaKnown RBP9.28□□□□□ -0.92
PHGDH-228ENST00000641847 SMOXQ9NWM0 555 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 KCTD5Q9NXV2 234 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 TXNDC16Q9P2K2 825 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 PSMC3IPQ9P2W1 217 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-228ENST00000641847 FETUBQ9UGM5 382 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 SLC24A2Q9UI40 661 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 PSAT1Q9Y617 370 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 NFS1Q9Y697 457 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 IKBKGQ9Y6K9 419 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 CREBBPQ92793 2442 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 COL5A1P20908 1838 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-228ENST00000641847 TRPM6Q9BX84 2022 aa9.27□□□□□ -0.92
PHGDH-228ENST00000641847 BSNQ9UPA5 3926 aa9.27□□□□□ -0.92
PHGDH-228ENST00000641847 TRBV5-4A0A0C4DH59 114 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 K7ESM1 405 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 TLR4O00206 839 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 MAP2K7O14733 419 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 PFDN6O15212 129 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 INPP4BO15327 924 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 SLC31A1O15431 190 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 LATO43561 262 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 TCEA3O75764 348 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 FAM155BO75949 473 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 PAK4O96013 591 aaPredicted RBP9.27□□□□□ -0.93
PHGDH-228ENST00000641847 IGHV4-34P06331 123 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 PYGLP06737 847 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 HNRNPA2B1P22626 353 aaKnown RBP9.27□□□□□ -0.93
PHGDH-228ENST00000641847 ACRV1P26436 265 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 AKT2P31751 481 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 IGFALSP35858 605 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 RXRGP48443 463 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 TTPAP49638 278 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 CCR5P51681 352 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 CSE1LP55060 971 aaKnown RBP9.27□□□□□ -0.93
PHGDH-228ENST00000641847 ITIH4Q14624 930 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 TMED2Q15363 201 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 DBN1Q16643 649 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 KRT71Q3SY84 523 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 GPRC6AQ5T6X5 926 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 RNF187Q5TA31 235 aaPredicted RBP9.27□□□□□ -0.93
PHGDH-228ENST00000641847 LYPLAL1Q5VWZ2 237 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 ADAMTSL4Q6UY14 1074 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 PACS1Q6VY07 963 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 CERS6Q6ZMG9 384 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 TAOK1Q7L7X3 1001 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 GALNT7Q86SF2 657 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 NLRP8Q86W28 1048 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 SERPINA9Q86WD7 417 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 HEATR4Q86WZ0 1026 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 PHYKPLQ8IUZ5 450 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 PLA2G15Q8NCC3 412 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 DENND6BQ8NEG7 585 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 DCAKDQ8WVC6 231 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 SCG3Q8WXD2 468 aaKnown RBP9.27□□□□□ -0.93
PHGDH-228ENST00000641847 GLYATL1Q969I3 302 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 ATXN7L3BQ96GX2 97 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 VPS35Q96QK1 796 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 TTC1Q99614 292 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 ACBD3Q9H3P7 528 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 PPCSQ9HAB8 311 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 MBNL1Q9NR56 388 aaKnown RBP9.27□□□□□ -0.93
PHGDH-228ENST00000641847 WDR70Q9NW82 654 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms