RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 KLRC3Q07444 240 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 DDX39BQ13838 428 aaKnown RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 CBWD6Q4V339 395 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 FASTKD1Q53R41 847 aaKnown RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 TAF1BQ53T94 588 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 CBWD3Q5JTY5 395 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 PRAMEF8Q5VWM4 474 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 TMEM198Q66K66 360 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 OR6B2Q6IFH4 312 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 CEP85Q6P2H3 762 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 CES3Q6UWW8 571 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 SLC30A10Q6XR72 485 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 SGMS1Q86VZ5 419 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 ITPRIPQ8IWB1 547 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 LCORLQ8N3X6 602 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 CCNYQ8ND76 341 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 NSUN7Q8NE18 718 aaKnown RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 TBC1D15Q8TC07 691 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 ALG3Q92685 438 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 ST6GALNAC6Q969X2 333 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 ARHGEF26Q96DR7 871 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 ZNF560Q96MR9 790 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 PRICKLE1Q96MT3 831 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 ZNF577Q9BSK1 485 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 INPP5KQ9BT40 448 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 RTN4RQ9BZR6 473 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 RPRD1BQ9NQG5 326 aaKnown RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 PRMT7Q9NVM4 692 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 HEY2Q9UBP5 337 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 SLC4A4Q9Y6R1 1079 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 BRCA2P51587 3418 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 GBF1Q92538 1859 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 MYH4Q9Y623 1939 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 C5orf52A6NGY3 159 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 NCF1BA6NI72 391 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 NCF1CA8MVU1 366 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 POLR3GO15318 223 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 OIP5O43482 229 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 MED24O75448 989 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 BCAR3O75815 825 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 TTLL1O95922 423 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 CYP1A2P05177 515 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 AREGP15514 252 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 TAL1P17542 331 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 GALP22466 123 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 ECT2LQ008S8 904 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 SCGB2A2Q13296 93 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 UBXN2BQ14CS0 331 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 RTP5Q14D33 572 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 COL28A1Q2UY09 1125 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 TEX35Q5T0J7 233 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 SPATA46Q5T0L3 261 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 BRAT1Q6PJG6 821 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 P3H2Q8IVL5 708 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 ZNF444Q8N0Y2 327 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 CFAP52Q8N1V2 620 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 ARL14Q8N4G2 192 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 SPERTQ8NA61 448 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 TSPAN14Q8NG11 270 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 OR10S1Q8NGN2 331 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 OR8K5Q8NH50 307 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 CAGE1Q8TC20 777 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 SDR42E1Q8WUS8 393 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 NECTIN4Q96NY8 510 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 MTG1Q9BT17 334 aaPredicted RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 ADAMTS10Q9H324 1103 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 TFB2MQ9H5Q4 396 aaKnown RBP7.28□□□□□ -1.24
NECAP1-220ENST00000639841 ANKZF1Q9H8Y5 726 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 TMEM184CQ9NVA4 438 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 GDAP2Q9NXN4 497 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 MTUS1Q9ULD2 1270 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 U3KQV3 271 aa7.28□□□□□ -1.24
NECAP1-220ENST00000639841 NCOR1O75376 2440 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 SZT2Q5T011 3432 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 FITM1A5D6W6 292 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 CFAP73A6NFT4 308 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 E2F3O00716 465 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 TOX4O94842 621 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 NKX2-2O95096 273 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 CXCL14O95715 111 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 NDUFB10O96000 172 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 FGF4P08620 206 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 IL7RP16871 459 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 CYP2A7P20853 494 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 AMPD1P23109 780 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 ACP1P24666 158 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 SERPINB6P35237 376 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 HSD17B2P37059 387 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 CDH13P55290 713 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 TFAP4Q01664 338 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 RBPJQ06330 500 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 ACSM1Q08AH1 577 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 EFTUD2Q15029 972 aaKnown RBP eCLIP7.27□□□□□ -1.25
NECAP1-220ENST00000639841 EIF4HQ15056 248 aaKnown RBP7.27□□□□□ -1.25
NECAP1-220ENST00000639841 PCGF3Q3KNV8 242 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 KIAA1755Q5JYT7 1200 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 ANKS6Q68DC2 871 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 TMEM182Q6ZP80 229 aaPredicted RBP7.27□□□□□ -1.25
NECAP1-220ENST00000639841 CPXM2Q8N436 756 aa7.27□□□□□ -1.25
NECAP1-220ENST00000639841 SETD9Q8NE22 299 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms