RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 NIPSNAP2O75323 286 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 INMTO95050 263 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 TBX18O95935 607 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 CST1P01037 141 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 NPPAP01160 153 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 JAK1P23458 1154 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 IL10RBQ08334 325 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 SERINC3Q13530 473 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 PERM1Q5SV97 790 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 CYP20A1Q6UW02 462 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 SPESP1Q6UW49 350 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 SNX29P2Q8IUI4 249 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 ABI1Q8IZP0 508 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 OR4K2Q8NGD2 314 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 PEX13Q92968 403 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 MUL1Q969V5 352 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 MYEOVQ96EZ4 313 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 OSBPL10Q9BXB5 764 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 SMPD4Q9NXE4 827 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 VAPAQ9P0L0 249 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 TSR3Q9UJK0 312 aaKnown RBP10.77□□□□□ -0.68
SNIP1-204ENST00000638725 BAG5Q9UL15 447 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 WDR37Q9Y2I8 494 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 POLR3HQ9Y535 204 aaPredicted RBP10.77□□□□□ -0.68
SNIP1-204ENST00000638725 ST14Q9Y5Y6 855 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 CPQQ9Y646 472 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 KRBA1A5PL33 1030 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 M0QZ92 97 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 M0QZQ0 153 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 TSPAN12O95859 305 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 HPRP00739 348 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 PBX3P40426 434 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 PPP2R2BQ00005 443 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 MAPRE1Q15691 268 aaKnown RBP10.77□□□□□ -0.69
SNIP1-204ENST00000638725 DDR2Q16832 855 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 C18orf21Q32NC0 220 aaPredicted RBP10.77□□□□□ -0.69
SNIP1-204ENST00000638725 SLC39A12Q504Y0 691 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 TXNDC11Q6PKC3 985 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 IL27RAQ6UWB1 636 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 MIB1Q86YT6 1006 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 THEM5Q8N1Q8 247 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 ZNF555Q8NEP9 628 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 EEF1AKMT1Q8WVE0 214 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 RPRD1AQ96P16 312 aaPredicted RBP10.77□□□□□ -0.69
SNIP1-204ENST00000638725 ALPK1Q96QP1 1244 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 PAK1IP1Q9NWT1 392 aaPredicted RBP10.77□□□□□ -0.69
SNIP1-204ENST00000638725 FLRT1Q9NZU1 646 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 LIMD1Q9UGP4 676 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 ENPP5Q9UJA9 477 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 FNDC3AQ9Y2H6 1198 aaKnown RBP10.77□□□□□ -0.69
SNIP1-204ENST00000638725 CCL15-CCL14A0A0B4J2E2 113 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 CLDN25C9JDP6 229 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 PTGES3LE9PB15 166 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 OR1I1O60431 355 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 ALDH2P05091 517 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 CAPN1P07384 714 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 PRKACGP22612 351 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 ZNF140P52738 457 aaPredicted RBP10.77□□□□□ -0.69
SNIP1-204ENST00000638725 GP2P55259 537 aaKnown RBP10.77□□□□□ -0.69
SNIP1-204ENST00000638725 OXCT1P55809 520 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 ILF2Q12905 390 aaKnown RBP10.77□□□□□ -0.69
SNIP1-204ENST00000638725 PWP1Q13610 501 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 NR6A1Q15406 480 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 CCL15Q16663 113 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 GPSM1Q86YR5 675 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 PARP8Q8N3A8 854 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 NKAPQ8N5F7 415 aaKnown RBP10.77□□□□□ -0.69
SNIP1-204ENST00000638725 TTC16Q8NEE8 873 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 OR2T12Q8NG77 320 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 OR10A6Q8NH74 314 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 LINGO1Q96FE5 620 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 ABHD8Q96I13 439 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 FEM1AQ9BSK4 669 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 CCDC90BQ9GZT6 254 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 HEBP1Q9NRV9 189 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 NLE1Q9NVX2 485 aaPredicted RBP10.77□□□□□ -0.69
SNIP1-204ENST00000638725 DNAJB9Q9UBS3 223 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 TRPV2Q9Y5S1 764 aa10.77□□□□□ -0.69
SNIP1-204ENST00000638725 GBF1Q92538 1859 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 CENPFP49454 3210 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 IGLV3-10A0A075B6K4 115 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 FAM92AA1XBS5 289 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 TMEM247A6NEH6 219 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 ARNTLO00327 626 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 KPNA4O00629 521 aaPredicted RBP10.76□□□□□ -0.69
SNIP1-204ENST00000638725 GNGT2O14610 69 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 ANKRD28O15084 1053 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 GSTA4O15217 222 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 GMNNO75496 209 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 CNPP09543 421 aaKnown RBP10.76□□□□□ -0.69
SNIP1-204ENST00000638725 ZNF865P0CJ78 1059 aaPredicted RBP10.76□□□□□ -0.69
SNIP1-204ENST00000638725 OR1E1P30953 314 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 HPCAL1P37235 193 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 TRIM32Q13049 653 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 ZNF846Q147U1 533 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 OXA1LQ15070 435 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 CTF1Q16619 201 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 PSAPL1Q6NUJ1 521 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 DNAJC14Q6Y2X3 702 aaPredicted RBP10.76□□□□□ -0.69
SNIP1-204ENST00000638725 PIANPQ8IYJ0 282 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms