RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 LRRC58Q96CX6 371 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 EGFL8Q99944 293 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 IPPKQ9H8X2 491 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 SPATS2LQ9NUQ6 558 aaKnown RBP21.18■□□□□ 0.98
CLN6-224ENST00000638076 TCRBV3S1A0A5B6 114 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 AGAP14A8MT82 685 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 TAPBPO15533 448 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 SYNCRIPO60506 623 aaKnown RBP21.18■□□□□ 0.98
CLN6-224ENST00000638076 KATNA1O75449 491 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 ZFP36L2P47974 494 aaKnown RBP21.18■□□□□ 0.98
CLN6-224ENST00000638076 GJA8P48165 433 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 HTR6P50406 440 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 RCAN2Q14206 197 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 TEAD2Q15562 447 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 ATP6AP1LQ52LC2 224 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 PLPP4Q5VZY2 271 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 IL27RAQ6UWB1 636 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 SLC15A3Q8IY34 581 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 ABCG8Q9H221 673 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 SLCO3A1Q9UIG8 710 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 PPIL1Q9Y3C6 166 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 LAMA3Q16787 3333 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 A0A1W2PP18 115 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 RFPL2O75678 378 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 SLC22A3O75751 556 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 UGT2B4P06133 528 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 HSPA8P11142 646 aaKnown RBP21.17■□□□□ 0.98
CLN6-224ENST00000638076 LHCGRP22888 699 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 YBX1P67809 324 aaKnown RBP21.17■□□□□ 0.98
CLN6-224ENST00000638076 CARD16Q5EG05 197 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 FBXL19Q6PCT2 694 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 TSPEARQ8WU66 669 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 HBEGFQ99075 208 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 IL23AQ9NPF7 189 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 MYOFQ9NZM1 2061 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 STAMBPO95630 424 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 OTCP00480 354 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 NSG1P42857 185 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 PTPN5P54829 565 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 PDCD4Q53EL6 469 aaKnown RBP21.17■□□□□ 0.98
CLN6-224ENST00000638076 LRRC73Q5JTD7 316 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 RFLNAQ6ZTI6 216 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 SFRP1Q8N474 314 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 SLCO4A1Q96BD0 722 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 BBS2Q9BXC9 721 aa21.17■□□□□ 0.98
CLN6-224ENST00000638076 CPEB1Q9BZB8 566 aaKnown RBP21.17■□□□□ 0.98
CLN6-224ENST00000638076 ASPDHA6ND91 283 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 POP4O95707 220 aaKnown RBP21.16■□□□□ 0.98
CLN6-224ENST00000638076 SLC6A2P23975 617 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 TRAF3Q13114 568 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 ATP13A5Q4VNC0 1218 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 MCCC1Q96RQ3 725 aaPredicted RBP21.16■□□□□ 0.98
CLN6-224ENST00000638076 LATS2Q9NRM7 1088 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 CMTM6Q9NX76 183 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 CAPNS1P04632 268 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 PABPC1P11940 636 aaKnown RBP21.16■□□□□ 0.98
CLN6-224ENST00000638076 GDF5P43026 501 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 POLR2JP52435 117 aaKnown RBP21.16■□□□□ 0.98
CLN6-224ENST00000638076 Q6ZVU0 165 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 MILR1Q7Z6M3 343 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 CHST14Q8NCH0 376 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 LRTOMTQ8WZ04 291 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 PBXIP1Q96AQ6 731 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 ZDHHC3Q9NYG2 299 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 WWOXQ9NZC7 414 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 PDP2Q9P2J9 529 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 ZMYM5Q9UJ78 669 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 INSL6Q9Y581 213 aa21.16■□□□□ 0.98
CLN6-224ENST00000638076 CCDC154A6NI56 674 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 MOSPD3O75425 235 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 SLC7A1P30825 629 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 GRIA3P42263 894 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 NFYCQ13952 458 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 PDK3Q15120 406 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 TTLL9Q3SXZ7 439 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 PAGE3Q5JUK9 113 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 DUS3LQ96G46 650 aaKnown RBP21.15■□□□□ 0.98
CLN6-224ENST00000638076 COPS8Q99627 209 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 TMEM79Q9BSE2 394 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 TRIM8Q9BZR9 551 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 CEP44Q9C0F1 390 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 SEMA6AQ9H2E6 1030 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 LINC00597Q9H2U6 94 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 BRD9Q9H8M2 597 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 ZIM2Q9NZV7 527 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 IRAK3Q9Y616 596 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 ATP6V1B2P21281 511 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 PAX7P23759 505 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 IL12AP29459 219 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 FOXM1Q08050 763 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 ABRAXAS2Q15018 415 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 TLR1Q15399 786 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 SULT1C3Q6IMI6 304 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 OR2T34Q8NGX1 318 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 OR2T3Q8NH03 318 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 MYLIPQ8WY64 445 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 IRF7Q92985 503 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 RHBDF1Q96CC6 855 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 ZNF641Q96N77 438 aaPredicted RBP21.15■□□□□ 0.98
CLN6-224ENST00000638076 TDP1Q9NUW8 608 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms