RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 METRNLQ641Q3 311 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 ZNF449Q6P9G9 518 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 SNX20Q7Z614 316 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 LINC00523Q86TU6 105 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 OR2L2Q8NH16 312 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 COPS8Q99627 209 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 RAB33BQ9H082 229 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 VPS37BQ9H9H4 285 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 FAM8A1Q9UBU6 413 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 EPHA6Q9UF33 1036 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 PILRAQ9UKJ1 303 aa18.57■□□□□ 0.56
CLN6-221ENST00000637494 ATRXP46100 2492 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 MTHFD1P11586 935 aaKnown RBP18.56■□□□□ 0.56
CLN6-221ENST00000637494 STIP1P31948 543 aaKnown RBP18.56■□□□□ 0.56
CLN6-221ENST00000637494 ARL4DP49703 201 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 ZNF140P52738 457 aaPredicted RBP18.56■□□□□ 0.56
CLN6-221ENST00000637494 XIAPP98170 497 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 KLF1Q13351 362 aaPredicted RBP18.56■□□□□ 0.56
CLN6-221ENST00000637494 SEPT6Q14141 434 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 ZRANB3Q5FWF4 1079 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 PRSS42Q7Z5A4 293 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 ZFPM2Q8WW38 1151 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 RSC1A1Q92681 617 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 C12orf66Q96MD2 445 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 TMEM121Q9BTD3 319 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 FRMD8P1Q9BZ68 369 aaPredicted RBP18.56■□□□□ 0.56
CLN6-221ENST00000637494 WWP1Q9H0M0 922 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 GPN2Q9H9Y4 310 aaPredicted RBP18.56■□□□□ 0.56
CLN6-221ENST00000637494 APMAPQ9HDC9 416 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 GUCA1BQ9UMX6 200 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 HEBP2Q9Y5Z4 205 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 COLEC10Q9Y6Z7 277 aa18.56■□□□□ 0.56
CLN6-221ENST00000637494 ZNF891A8MT65 544 aaPredicted RBP18.55■□□□□ 0.56
CLN6-221ENST00000637494 STK17BO94768 372 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 LIFP15018 202 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 MC4RP32245 332 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 CA5AP35218 305 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 LEPRP48357 1165 aaKnown RBP18.55■□□□□ 0.56
CLN6-221ENST00000637494 LMAN1P49257 510 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 IL11RAQ14626 422 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 DENND5AQ6IQ26 1287 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 ARMC6Q6NXE6 501 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 FAM83HQ6ZRV2 1179 aaPredicted RBP18.55■□□□□ 0.56
CLN6-221ENST00000637494 FAM92BQ6ZTR7 304 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 TAS2R42Q7RTR8 314 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 RASGRP3Q8IV61 690 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 KLHDC8BQ8IXV7 354 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 NXPE1Q8N323 547 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 ESX1Q8N693 406 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 SLC35B2Q8TB61 432 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 UBXN4Q92575 508 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 EXTL1Q92935 676 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 LINC00615Q96LM1 132 aaPredicted RBP18.55■□□□□ 0.56
CLN6-221ENST00000637494 OR6C1Q96RD1 312 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 CCM2Q9BSQ5 444 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 ULBP3Q9BZM4 244 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 TMEM184BQ9Y519 407 aaPredicted RBP18.55■□□□□ 0.56
CLN6-221ENST00000637494 CAPN6Q9Y6Q1 641 aa18.55■□□□□ 0.56
CLN6-221ENST00000637494 ZNF106Q9H2Y7 1883 aaKnown RBP18.54■□□□□ 0.56
CLN6-221ENST00000637494 ERI2A8K979 691 aaKnown RBP18.54■□□□□ 0.56
CLN6-221ENST00000637494 AGAP14A8MT82 685 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 LDB2O43679 373 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 METTL18O95568 372 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 ATP1B2P14415 290 aaPredicted RBP18.54■□□□□ 0.56
CLN6-221ENST00000637494 NDUFS1P28331 727 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 ABHD18Q0P651 414 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 MSLNQ13421 630 aaPredicted RBP18.54■□□□□ 0.56
CLN6-221ENST00000637494 LAMB3Q13751 1172 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 KCTD11Q693B1 232 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 OOSP2Q86WS3 158 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 CFAP206Q8IYR0 622 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 DNAAF3Q8N9W5 541 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 SIDT2Q8NBJ9 832 aaKnown RBP18.54■□□□□ 0.56
CLN6-221ENST00000637494 GPR150Q8NGU9 434 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 HM13Q8TCT9 377 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 STYXQ8WUJ0 223 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 FAM96AQ9H5X1 160 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 PDE7BQ9NP56 450 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 NLE1Q9NVX2 485 aaPredicted RBP18.54■□□□□ 0.56
CLN6-221ENST00000637494 SIDT1Q9NXL6 827 aaKnown RBP18.54■□□□□ 0.56
CLN6-221ENST00000637494 ZDHHC3Q9NYG2 299 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 R3HDM2Q9Y2K5 976 aaKnown RBP18.54■□□□□ 0.56
CLN6-221ENST00000637494 CFAP20Q9Y6A4 193 aaKnown RBP18.54■□□□□ 0.56
CLN6-221ENST00000637494 SDK2Q58EX2 2172 aa18.54■□□□□ 0.56
CLN6-221ENST00000637494 A0A0U1RQJ8 604 aa18.53■□□□□ 0.56
CLN6-221ENST00000637494 UBA6A0AVT1 1052 aaPredicted RBP18.53■□□□□ 0.56
CLN6-221ENST00000637494 E7EVH7 732 aa18.53■□□□□ 0.56
CLN6-221ENST00000637494 AP2A1O95782 977 aa18.53■□□□□ 0.56
CLN6-221ENST00000637494 POLBP06746 335 aa18.53■□□□□ 0.56
CLN6-221ENST00000637494 TPH1P17752 444 aa18.53■□□□□ 0.56
CLN6-221ENST00000637494 PRLHRP49683 370 aa18.53■□□□□ 0.56
CLN6-221ENST00000637494 MC1RQ01726 317 aa18.53■□□□□ 0.56
CLN6-221ENST00000637494 MAP7Q14244 749 aa18.53■□□□□ 0.56
CLN6-221ENST00000637494 POU6F1Q14863 301 aa18.53■□□□□ 0.56
CLN6-221ENST00000637494 DNTTIP2Q5QJE6 756 aaKnown RBP18.53■□□□□ 0.56
CLN6-221ENST00000637494 KLHL6Q8WZ60 621 aa18.53■□□□□ 0.56
CLN6-221ENST00000637494 DNAJC1Q96KC8 554 aaKnown RBP18.53■□□□□ 0.56
CLN6-221ENST00000637494 CATSPER2Q96P56 530 aa18.53■□□□□ 0.56
CLN6-221ENST00000637494 INSM2Q96T92 566 aaPredicted RBP18.53■□□□□ 0.56
CLN6-221ENST00000637494 CD180Q99467 661 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms