RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MPLP40238 635 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 SLC26A3P40879 764 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 SKIV2L2P42285 1042 aaKnown RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 CTSKP43235 329 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 CD151P48509 253 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 HK3P52790 923 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 TMPRSS15P98073 1019 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 POU4F1Q01851 419 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 PPARDQ03181 441 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 TMEM115Q12893 351 aaPredicted RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 RPA4Q13156 261 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 PDE1CQ14123 709 aaPredicted RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 PTPRRQ15256 657 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 TMED2Q15363 201 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 KYNUQ16719 465 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 ZNF423Q2M1K9 1284 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 INAVAQ3KP66 663 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 TTLL9Q3SXZ7 439 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 KBTBD12Q3ZCT8 623 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 FAM153CQ494X1 144 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 HSP90AA5PQ58FG0 334 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 OXLD1Q5BKU9 147 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 FAM182AQ5T1J6 154 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 LVRNQ6Q4G3 990 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 LRIG3Q6UXM1 1119 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 PRR23BQ6ZRT6 265 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 Q6ZSR6 202 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 TAS2R42Q7RTR8 314 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 ADGRG6Q86SQ4 1221 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 ZC3HC1Q86WB0 502 aaKnown RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 GALNT13Q8IUC8 556 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 PIANPQ8IYJ0 282 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 OTUD6BQ8N6M0 293 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 FRMD1Q8N878 549 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 SUMF1Q8NBK3 374 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 PLA2G15Q8NCC3 412 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 PHC3Q8NDX5 983 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 ZNF417Q8TAU3 575 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 GDAP1Q8TB36 358 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 FBF1Q8TES7 1133 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 SLC44A1Q8WWI5 657 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 ANKRD7Q92527 254 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 ISL2Q96A47 359 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 TSPAN17Q96FV3 270 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 VPS39Q96JC1 886 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 PWWP2AQ96N64 755 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 SLC6A18Q96N87 628 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 OR2M4Q96R27 311 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 ZNF587Q96SQ5 575 aaPredicted RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 GPR22Q99680 433 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 RBBP8Q99708 897 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 MCMBPQ9BTE3 642 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 DHRS4Q9BTZ2 278 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 MIR1-1HGQ9H1L0 117 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 P2RY12Q9H244 342 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 VIPAS39Q9H9C1 493 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 PPANQ9NQ55 473 aaKnown RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 TAS2R13Q9NYV9 303 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 NCKIPSDQ9NZQ3 722 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 CD84Q9UIB8 345 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 CNOT6Q9ULM6 557 aaKnown RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 SLC6A14Q9UN76 642 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.62□□□□□ -1.35
UPF3B-205ENST00000636792 CSNK1G3Q9Y6M4 447 aa6.62□□□□□ -1.35
UPF3B-205ENST00000636792 NEMP2A6NFY4 417 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 MGAT4DA6NG13 374 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 OR5K4A6NMS3 321 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 ADARB2-AS1A8MUL3 147 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 K7ESM1 405 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 TPP1O14773 563 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 INPP4BO15327 924 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 GRID2O43424 1007 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 DNAJC6O75061 913 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 VPS26AO75436 327 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 FAM155BO75949 473 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 KRT37O76014 449 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 ACSL3O95573 720 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 ASMTLO95671 621 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 TNFP01375 233 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 CEACAM5P06731 702 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 ZNF806P0C7X5 589 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 CBSLP0DN79 551 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 PKMP14618 531 aaKnown RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 CBSP35520 551 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 HSD17B3P37058 310 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 MSH2P43246 934 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 CCT8P50990 548 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 SEMG2Q02383 582 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 ILF3Q12906 894 aaKnown RBP eCLIP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 SLC14A1Q13336 389 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 SLC29A2Q14542 456 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 ELOCQ15369 112 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 PYCR3Q53H96 274 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 PLEKHS1Q5SXH7 462 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 BEND6Q5SZJ8 279 aaPredicted RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 PTRHD1Q6GMV3 140 aaKnown RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 TRMT10BQ6PF06 316 aaKnown RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 CES3Q6UWW8 571 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 WASH2PQ6VEQ5 465 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 NEK10Q6ZWH5 1172 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms