RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 TMEM74Q96NL1 305 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF251Q9BRH9 671 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 BTBD2Q9BX70 525 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 GDF3Q9NR23 364 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 MGAT4CQ9UBM8 478 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 R3HDM2Q9Y2K5 976 aaKnown RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 TRIP12Q14669 1992 aaPredicted RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 PRAMEF33A0A0G2JMD5 474 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 RFXANKO14593 260 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 PRAMEF10O60809 474 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 NTRK1P04629 796 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 TAS2R39P59534 338 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 CDK16Q00536 496 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 TXNRD1Q16881 649 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 HECTD2Q5U5R9 776 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 CNTD1Q8N815 330 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 TMEM145Q8NBT3 493 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 OR5T2Q8NGG2 359 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 FCRL2Q96LA5 508 aaPredicted RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 KLQ9UEF7 1012 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 NR2E1Q9Y466 385 aa5.96□□□□□ -1.46
SCN1A-212ENST00000636194 DNMT1P26358 1616 aaKnown RBP5.96□□□□□ -1.46
SCN1A-212ENST00000636194 OVOS2A0A0G2JMS6 1433 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 OVOS2A0A0J9YW53 1432 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 OVOS2Q6IE36 1432 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 A0A1W2PQ67 120 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 IFNA5P01569 189 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ACTR1BP42025 376 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CTSKP43235 329 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TSFMP43897 325 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 OC90Q02509 493 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 DYRK1AQ13627 763 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 KLHL22Q53GT1 634 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 RNASE10Q5GAN6 216 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PXKQ7Z7A4 578 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 GALNT13Q8IUC8 556 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 KIF2BQ8N4N8 673 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 HJURPQ8NCD3 748 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TOR1AIP2Q8NFQ8 470 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TTLQ8NG68 377 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PNPT1Q8TCS8 783 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 MTFMTQ96DP5 389 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 USP29Q9HBJ7 922 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PCDH12Q9NPG4 1184 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 THUMPD1Q9NXG2 353 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 EIF3KQ9UBQ5 218 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 YTHDF2Q9Y5A9 579 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 HTR3EA5X5Y0 456 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 NEMP2A6NFY4 417 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TMEM150CB9EJG8 249 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PDPK1O15530 556 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TRAPPC6AO75865 159 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 SLC25A14O95258 325 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TPH1P17752 444 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CCZ1BP86790 482 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CCZ1P86791 482 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PPP3CAQ08209 521 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PTPN20Q4JDL3 420 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CAPN13Q6MZZ7 669 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 NIPAL1Q6NVV3 410 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 POMZP3Q6PJE2 187 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF782Q6ZMW2 699 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 DCDC5Q6ZRR9 648 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF627Q7L945 461 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TMEM86AQ8N2M4 240 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 UBA3Q8TBC4 463 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 EPS8L3Q8TE67 593 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TRIB2Q92519 343 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 MSI2Q96DH6 328 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 DIRAS2Q96HU8 199 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TBCBQ99426 244 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 LPIN3Q9BQK8 851 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 MOV10Q9HCE1 1003 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 POLMQ9NP87 494 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 GPATCH2Q9NW75 528 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TMEM9Q9P0T7 183 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 KLHL13Q9P2N7 655 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PCDHA3Q9Y5H8 950 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ASTN2O75129 1339 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 H7C417 338 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ITGA10O75578 1167 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CST1P01037 141 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 KCNA6P17658 529 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 MAGEA3P43357 314 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 HSPA14Q0VDF9 509 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 DNASE1L3Q13609 305 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 HABP2Q14520 560 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 GINS1Q14691 196 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF101Q8IZC7 436 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 MARVELD2Q8N4S9 558 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ELP5Q8TE02 316 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ASB8Q9H765 288 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ABCC13Q9NSE7 274 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ASF1AQ9Y294 204 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 DNAJC16Q9Y2G8 782 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 LOC100509620A0A075B734 347 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 KCNK1O00180 336 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TRDMT1O14717 391 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 POLR1CO15160 346 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms