RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 TRBC2A0A5B9 178 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ARHGEF37A1IGU5 675 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 C5orf51A6NDU8 294 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ZNF716A6NP11 495 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 H7C1Q1 480 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 STX16O14662 325 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 TNPO2O14787 897 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 BCAT2O15382 392 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KLK10O43240 276 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 TNFSF14O43557 240 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 MTX2O75431 263 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CLN5O75503 358 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CRTAPO75718 401 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CBR3O75828 277 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 C1QL1O75973 258 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KAT7O95251 611 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KCNK5O95279 499 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 VNN2O95498 520 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 GNA14O95837 355 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 AK1P00568 194 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 OPN1LWP04000 364 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KRT6BP04259 564 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ASNSP08243 561 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ZNF735P0CB33 412 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 HSPA8P11142 646 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CYP19A1P11511 503 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KRT3P12035 628 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SRCP12931 536 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CKMT2P17540 419 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 AHCYP23526 432 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ANXA13P27216 316 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 PTPN6P29350 595 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 PRKAR2BP31323 418 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CHRNA3P32297 505 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ICAM3P32942 547 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 EVI2BP34910 448 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 NUP62P37198 522 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ARHGAP25P42331 645 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CCR10P46092 362 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 NRIP1P48552 1158 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KRT6CP48668 564 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 LIG4P49917 911 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 PLCD1P51178 756 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 JAK3P52333 1124 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 RAE1P78406 368 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SPIBQ01892 262 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SRSF4Q08170 494 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ABRQ12979 859 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 GAB1Q13480 694 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 BFSP2Q13515 415 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 RAPSNQ13702 412 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ALCAMQ13740 583 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SNTB1Q13884 538 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CYLC2Q14093 348 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 VEPH1Q14D04 833 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 STK38Q15208 465 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KRT31Q15323 416 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ZMYND11Q15326 602 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 MED22Q15528 200 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 LEXMQ3ZCV2 418 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SLC9B1Q4ZJI4 515 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 HERC4Q5GLZ8 1057 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 FSCBQ5H9T9 825 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 PCID2Q5JVF3 399 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 TMEM63BQ5T3F8 832 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 NDUFAF5Q5TEU4 345 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 PRAMEF20Q5VT98 475 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ANKRD40Q6AI12 368 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CEP85Q6P2H3 762 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KLHL35Q6PF15 583 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 DEGS2Q6QHC5 323 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 RBPMS2Q6ZRY4 209 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 C1orf186Q6ZWK4 172 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SYT13Q7L8C5 426 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KRT27Q7Z3Y8 459 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SPATA19Q7Z5L4 167 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 AMZ2Q86W34 360 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 LAS2Q8IYD9 372 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SLC43A2Q8N370 569 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KDM8Q8N371 416 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 TCAIMQ8N3R3 496 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 PTGR2Q8N8N7 351 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 EXD3Q8N9H8 876 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 Q8N9P0 234 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 TERB1Q8NA31 727 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 C9orf106Q8NAJ2 232 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 KDM1BQ8NB78 822 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 RBM15BQ8NDT2 890 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 OR2T34Q8NGX1 318 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 OR6S1Q8NH40 331 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 ZCCHC10Q8TBK6 192 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 CHURC1Q8WUH1 139 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 DNAJA4Q8WW22 397 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 EXT2Q93063 718 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SLAMF9Q96A28 289 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 THOC1Q96FV9 657 aaKnown RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 HMCESQ96FZ2 354 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 PGM2Q96G03 612 aa2.94□□□□□ -1.94
PSPC1-208ENST00000635562 FAM71F1Q96KD3 344 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-208ENST00000635562 SAMD8Q96LT4 415 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms