RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 CSF2RBP32927 897 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 PAFAH1B1P43034 410 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 LIMK2P53671 638 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 ACVR1Q04771 509 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 SQSTM1Q13501 440 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 AARS2Q5JTZ9 985 aaKnown RBP20.45■□□□□ 0.86
SF1-221ENST00000633899 PAPD7Q5XG87 772 aaKnown RBP20.45■□□□□ 0.86
SF1-221ENST00000633899 TMEM71Q6P5X7 295 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 CERS6Q6ZMG9 384 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 OTUD6BQ8N6M0 293 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 NCSTNQ92542 709 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 FGF11Q92914 225 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 CCDC74BQ96LY2 380 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 CCM2Q9BSQ5 444 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 WWP1Q9H0M0 922 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 DDX47Q9H0S4 455 aaKnown RBP20.45■□□□□ 0.86
SF1-221ENST00000633899 IMP3Q9NV31 184 aaKnown RBP20.45■□□□□ 0.86
SF1-221ENST00000633899 SYBUQ9NX95 663 aa20.45■□□□□ 0.86
SF1-221ENST00000633899 FREM2Q5SZK8 3169 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 IGHV5-10-1A0A0J9YXX1 117 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 RRP8O43159 456 aaKnown RBP20.44■□□□□ 0.86
SF1-221ENST00000633899 SGTAO43765 313 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 POLBP06746 335 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 AMD1P17707 334 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 MLLT3P42568 568 aaPredicted RBP20.44■□□□□ 0.86
SF1-221ENST00000633899 MAGEA6P43360 314 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 ERVPABLB-1P60509 514 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 TRA2AQ13595 282 aaKnown RBP eCLIP20.44■□□□□ 0.864e-10■□□□□ 9.6
SF1-221ENST00000633899 RPE65Q16518 533 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 CASC4Q6P4E1 433 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 LRRC69Q6ZNQ3 347 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 ZNF534Q76KX8 674 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 RCBTB1Q8NDN9 531 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 CPT1BQ92523 772 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 C12orf66Q96MD2 445 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 SLC46A1Q96NT5 459 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 CATSPERZQ9NTU4 200 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 SAMD15Q9P1V8 674 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 PISDQ9UG56 409 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 ASIC3Q9UHC3 531 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 USP24Q9UPU5 2620 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 APC2O95996 2303 aa20.44■□□□□ 0.86
SF1-221ENST00000633899 EPG5Q9HCE0 2579 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 C17orf113A0A1B0GUU1 675 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 A0A1W2PNU3 283 aaPredicted RBP20.43■□□□□ 0.86
SF1-221ENST00000633899 HGSO14964 777 aaPredicted RBP20.43■□□□□ 0.86
SF1-221ENST00000633899 UBXN7O94888 489 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 FTH1P02794 183 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 ITGA2BP08514 1039 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 GSTM1P09488 218 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 OR56A5P0C7T3 313 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 HGFP14210 728 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 HOXB3P14651 431 aaPredicted RBP20.43■□□□□ 0.86
SF1-221ENST00000633899 MPSTP25325 297 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 PCBP4P57723 403 aaKnown RBP20.43■□□□□ 0.86
SF1-221ENST00000633899 GSTM4Q03013 218 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 GPR18Q14330 331 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 KRT33BQ14525 404 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 PLCL1Q15111 1095 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 SNAP47Q5SQN1 464 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 ANKRD22Q5VYY1 191 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 WDR74Q6RFH5 385 aaPredicted RBP20.43■□□□□ 0.86
SF1-221ENST00000633899 IGF2-ASQ6U949 168 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 PACS1Q6VY07 963 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 ZNF574Q6ZN55 896 aaPredicted RBP20.43■□□□□ 0.86
SF1-221ENST00000633899 JAMLQ86YT9 394 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 CLDN19Q8N6F1 224 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 SNIP1Q8TAD8 396 aaKnown RBP20.43■□□□□ 0.86
SF1-221ENST00000633899 COG4Q9H9E3 785 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 MRM3Q9HC36 420 aaKnown RBP20.43■□□□□ 0.86
SF1-221ENST00000633899 XAB2Q9HCS7 855 aaKnown RBP20.43■□□□□ 0.86
SF1-221ENST00000633899 SLC40A1Q9NP59 571 aa20.43■□□□□ 0.86
SF1-221ENST00000633899 CFAP20Q9Y6A4 193 aaKnown RBP20.43■□□□□ 0.86
SF1-221ENST00000633899 URB1O60287 2271 aaKnown RBP20.42■□□□□ 0.86
SF1-221ENST00000633899 PMS2P1A4D2B8 440 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 GOLGA8MH3BSY2 632 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 TLX3O43711 291 aaPredicted RBP20.42■□□□□ 0.86
SF1-221ENST00000633899 TMEM63AO94886 807 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 THRAP10827 490 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 MTHFD1P11586 935 aaKnown RBP20.42■□□□□ 0.86
SF1-221ENST00000633899 TYRP1P17643 537 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 NMBRP28336 390 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 CSTF2P33240 577 aaKnown RBP eCLIP20.42■□□□□ 0.86
SF1-221ENST00000633899 PLXDC1Q8IUK5 500 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 SGSM3Q96HU1 749 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 RUNDC3BQ96NL0 473 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 KIFC1Q9BW19 673 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 ASCL3Q9NQ33 180 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 TREX1Q9NSU2 369 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 TMEM9Q9P0T7 183 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 SOX13Q9UN79 622 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 NEU2Q9Y3R4 380 aa20.42■□□□□ 0.86
SF1-221ENST00000633899 PRAMEF33A0A0G2JMD5 474 aa20.41■□□□□ 0.86
SF1-221ENST00000633899 A8MU76 341 aa20.41■□□□□ 0.86
SF1-221ENST00000633899 IFRD1O00458 451 aaPredicted RBP20.41■□□□□ 0.86
SF1-221ENST00000633899 CD3EAPO15446 510 aaKnown RBP20.41■□□□□ 0.86
SF1-221ENST00000633899 AVILO75366 819 aa20.41■□□□□ 0.86
SF1-221ENST00000633899 MLNP12872 115 aa20.41■□□□□ 0.86
SF1-221ENST00000633899 PAMP19021 973 aa20.41■□□□□ 0.86
SF1-221ENST00000633899 TTPAP49638 278 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms