RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ACSL1P33121 698 aa12.3□□□□□ -0.44
SYNGAP1-207ENST00000628646 ZNF542PQ5EBM4 170 aa12.3□□□□□ -0.44
SYNGAP1-207ENST00000628646 PRAMEF14Q5SWL7 426 aa12.3□□□□□ -0.44
SYNGAP1-207ENST00000628646 PIWIL2Q8TC59 973 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-207ENST00000628646 PRKAB1Q9Y478 270 aa12.3□□□□□ -0.44
SYNGAP1-207ENST00000628646 KNTC1P50748 2209 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 SUPT3HB4E1H0 165 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 G3V2L1 256 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 H3BMM5 538 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 SLC7A4O43246 635 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 SUPT3HO75486 399 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 ENO1P06733 434 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 SUOXP51687 545 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 CYP2U1Q7Z449 544 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 RBM15BQ8NDT2 890 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 PJA1Q8NG27 643 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 RBBP8Q99708 897 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 TRPV5Q9NQA5 729 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 PPM1HQ9ULR3 514 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 DOCK4Q8N1I0 1966 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 A0A087X1B8 175 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 TRPC5OSA6NMA1 111 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 AURKAO14965 403 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 MAP3K7O43318 606 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 HK2P52789 917 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 CLDN2P57739 230 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 UAP1L1Q3KQV9 507 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 KIAA0930Q6ICG6 404 aaPredicted RBP12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 KIAA1161Q6NSJ0 714 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 TMEM92Q6UXU6 159 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 NAPRTQ6XQN6 538 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 SYT13Q7L8C5 426 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 SLC41A1Q8IVJ1 513 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 C10orf107Q8IVU9 208 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 CLDN19Q8N6F1 224 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 CXorf40BQ96DE9 158 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 CDH19Q9H159 772 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 GEMIN8Q9NWZ8 242 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 KLQ9UEF7 1012 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 OR1A2Q9Y585 309 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 SLC35G4P0C7Q5 338 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 BMP1P13497 986 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 ACP5P13686 325 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 HNRNPLP14866 589 aaKnown RBP eCLIP12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 PTDSS1P48651 473 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 ARL4DP49703 201 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 LIMK2P53671 638 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 PRKAA1Q13131 559 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 KPNB1Q14974 876 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 CNSTQ6PJW8 725 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 LIPIQ6XZB0 460 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 KIAA0408Q6ZU52 694 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 CMC1Q7Z7K0 106 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 HEXDCQ8WVB3 486 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 CXorf56Q9H5V9 222 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 IMP3Q9NV31 184 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 NCKIPSDQ9NZQ3 722 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 COPG2Q9UBF2 871 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 VTI1BQ9UEU0 232 aa12.29□□□□□ -0.44
SYNGAP1-207ENST00000628646 PRR5-ARHGAP8B1AHC4 643 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 QSOX1O00391 747 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 SERPINA6P08185 405 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 AOC1P19801 751 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 HMGCLP35914 325 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 ACTR1BP42025 376 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 SPINT3P49223 89 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 CLCN5P51795 746 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 ACTR1AP61163 376 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 ARHGAP8P85298 464 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 CAMK2GQ13555 558 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 CFAP206Q8IYR0 622 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 LENG8Q96PV6 779 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 C1QTNF1Q9BXJ1 281 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 SNX15Q9NRS6 342 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 PSMD13Q9UNM6 376 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 CHRNB1P11230 501 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 PKMP14618 531 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 BLKP51451 505 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 ABRQ12979 859 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 UBAP2LQ14157 1087 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 INPP5AQ14642 412 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 GPR33Q49SQ1 333 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 LDLRAP1Q5SW96 308 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 HSD11B1LQ7Z5J1 315 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 SLC22A9Q8IVM8 553 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 MRGPRX3Q96LB0 322 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 TAGLN3Q9UI15 199 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 CA5BQ9Y2D0 317 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 ATRXP46100 2492 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 TMEM114B3SHH9 223 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 KDM1AO60341 852 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 GUCA1CO95843 209 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 HNRNPA2B1P22626 353 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 GPRC6AQ5T6X5 926 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 MDGA1Q8NFP4 955 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 EDAQ92838 391 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 RSPH9Q9H1X1 276 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 VCXQ9H320 206 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms