RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 CLCA4Q14CN2 919 aa21.9■■□□□ 1.1
SF1-220ENST00000626028 LYPLAL1Q5VWZ2 237 aa21.9■■□□□ 1.1
SF1-220ENST00000626028 KLHL35Q6PF15 583 aa21.9■■□□□ 1.1
SF1-220ENST00000626028 TAB3Q8N5C8 712 aaPredicted RBP21.9■■□□□ 1.1
SF1-220ENST00000626028 RCBTB1Q8NDN9 531 aa21.9■■□□□ 1.1
SF1-220ENST00000626028 HM13Q8TCT9 377 aa21.9■■□□□ 1.1
SF1-220ENST00000626028 SNRNP27Q8WVK2 155 aaKnown RBP21.9■■□□□ 1.1
SF1-220ENST00000626028 TTC1Q99614 292 aa21.9■■□□□ 1.1
SF1-220ENST00000626028 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.9■■□□□ 1.1
SF1-220ENST00000626028 EPHA6Q9UF33 1036 aa21.9■■□□□ 1.1
SF1-220ENST00000626028 WDR37Q9Y2I8 494 aa21.9■■□□□ 1.1
SF1-220ENST00000626028 OR52A4PA6NMU1 304 aa21.89■■□□□ 1.09
SF1-220ENST00000626028 FGF3P11487 239 aaPredicted RBP21.89■■□□□ 1.09
SF1-220ENST00000626028 GPR18Q14330 331 aa21.89■■□□□ 1.09
SF1-220ENST00000626028 RPE65Q16518 533 aa21.89■■□□□ 1.09
SF1-220ENST00000626028 PACS1Q6VY07 963 aa21.89■■□□□ 1.09
SF1-220ENST00000626028 CERS6Q6ZMG9 384 aa21.89■■□□□ 1.09
SF1-220ENST00000626028 FAM83HQ6ZRV2 1179 aaPredicted RBP21.89■■□□□ 1.09
SF1-220ENST00000626028 DET1Q7L5Y6 550 aa21.89■■□□□ 1.09
SF1-220ENST00000626028 SERPINA9Q86WD7 417 aa21.89■■□□□ 1.09
SF1-220ENST00000626028 GLIS1Q8NBF1 620 aa21.89■■□□□ 1.09
SF1-220ENST00000626028 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.89■■□□□ 1.09
SF1-220ENST00000626028 TEFMQ96QE5 360 aaKnown RBP21.89■■□□□ 1.09
SF1-220ENST00000626028 TBC1D10AQ9BXI6 508 aa21.89■■□□□ 1.09
SF1-220ENST00000626028 TMEM9Q9P0T7 183 aa21.89■■□□□ 1.09
SF1-220ENST00000626028 HEBP2Q9Y5Z4 205 aa21.89■■□□□ 1.09
SF1-220ENST00000626028 PRAMEF33A0A0G2JMD5 474 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 F8W8V4 182 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 PRAMEF10O60809 474 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 SLC35G4P0C7Q5 338 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 LIPCP11150 499 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 MTHFD1P11586 935 aaKnown RBP21.88■■□□□ 1.09
SF1-220ENST00000626028 ETS1P14921 441 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 AMD1P17707 334 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 NDUFS1P28331 727 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 ETV5P41161 510 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 NSG1P42857 185 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 CAPZBP47756 277 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 RPA4Q13156 261 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 TSTD2Q5T7W7 516 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 ZNF449Q6P9G9 518 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 TAS2R42Q7RTR8 314 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 REXO1L1PQ8IX06 675 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 PRELID2Q8N945 189 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 OR13J1Q8NGT2 312 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 USP7Q93009 1102 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 ZPBPQ9BS86 351 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 IL22Q9GZX6 179 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 OGFRQ9NZT2 677 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 MGAQ8IWI9 3026 aa21.88■■□□□ 1.09
SF1-220ENST00000626028 LOC400499M0QZD8 3231 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.87■■□□□ 1.09
SF1-220ENST00000626028 TEX51A0A1B0GUA7 166 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 C9orf172C9J069 976 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 CES2O00748 559 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 CCL4P13236 92 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 PPARGP37231 505 aaPredicted RBP21.87■■□□□ 1.09
SF1-220ENST00000626028 MAPK9P45984 424 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 MAPK10P53779 464 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 CLN3Q13286 438 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 AFTPHQ6ULP2 937 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 GPR155Q7Z3F1 870 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 BMPERQ8N8U9 685 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 ZDHHC12Q96GR4 267 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 NAF1Q96HR8 494 aaKnown RBP21.87■■□□□ 1.09
SF1-220ENST00000626028 FAM96AQ9H5X1 160 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 FBXO8Q9NRD0 319 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 PIH1D1Q9NWS0 290 aaKnown RBP21.87■■□□□ 1.09
SF1-220ENST00000626028 COLEC10Q9Y6Z7 277 aa21.87■■□□□ 1.09
SF1-220ENST00000626028 CCL22O00626 93 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 KIF5CO60282 957 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 ZSCAN5DPP0CG00 497 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 TPSB2P20231 275 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 PBLDP30039 288 aaPredicted RBP21.86■■□□□ 1.09
SF1-220ENST00000626028 FOXN2P32314 431 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 CD151P48509 253 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 NPY2RP49146 381 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 MC2RQ01718 297 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 TPSAB1Q15661 275 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 CYP1B1Q16678 543 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 PCID2Q5JVF3 399 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 DCAF12Q5T6F0 453 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 CAPRIN2Q6IMN6 1127 aaKnown RBP21.86■■□□□ 1.09
SF1-220ENST00000626028 DTX1Q86Y01 620 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 PIANPQ8IYJ0 282 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 CFAP206Q8IYR0 622 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 PPHLN1Q8NEY8 458 aaKnown RBP21.86■■□□□ 1.09
SF1-220ENST00000626028 C9orf72Q96LT7 481 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 FCRL3Q96P31 734 aaPredicted RBP21.86■■□□□ 1.09
SF1-220ENST00000626028 WWP1Q9H0M0 922 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 SLC39A1Q9NY26 324 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 PSMD13Q9UNM6 376 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 TCAF1Q9Y4C2 921 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 PCDHB11Q9Y5F2 797 aa21.86■■□□□ 1.09
SF1-220ENST00000626028 CCDC162PA2VCL2 907 aa21.85■■□□□ 1.09
SF1-220ENST00000626028 STMND1H3BQB6 276 aa21.85■■□□□ 1.09
SF1-220ENST00000626028 PGRMC1O00264 195 aaKnown RBP21.85■■□□□ 1.09
SF1-220ENST00000626028 MPSTP25325 297 aa21.85■■□□□ 1.09
SF1-220ENST00000626028 GRIA1P42261 906 aa21.85■■□□□ 1.09
SF1-220ENST00000626028 KCNJ1P48048 391 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms