RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 TRIM56Q9BRZ2 755 aaKnown RBP9.04□□□□□ -0.96
NELFE-214ENST00000625905 CCM2Q9BSQ5 444 aa9.04□□□□□ -0.96
NELFE-214ENST00000625905 TSSK1BQ9BXA7 367 aa9.04□□□□□ -0.96
NELFE-214ENST00000625905 TMEM121BQ9BXQ6 578 aaPredicted RBP9.04□□□□□ -0.96
NELFE-214ENST00000625905 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.04□□□□□ -0.96
NELFE-214ENST00000625905 FOXP3Q9BZS1 431 aa9.04□□□□□ -0.96
NELFE-214ENST00000625905 WWP1Q9H0M0 922 aa9.04□□□□□ -0.96
NELFE-214ENST00000625905 COG4Q9H9E3 785 aa9.04□□□□□ -0.96
NELFE-214ENST00000625905 EPB41L5Q9HCM4 733 aa9.04□□□□□ -0.96
NELFE-214ENST00000625905 IMP3Q9NV31 184 aaKnown RBP9.04□□□□□ -0.96
NELFE-214ENST00000625905 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.04□□□□□ -0.96
NELFE-214ENST00000625905 SCHIP1Q9P0W5 487 aaPredicted RBP9.04□□□□□ -0.96
NELFE-214ENST00000625905 ACSL5Q9ULC5 683 aa9.04□□□□□ -0.96
NELFE-214ENST00000625905 ATXN7L1Q9ULK2 861 aaPredicted RBP9.04□□□□□ -0.96
NELFE-214ENST00000625905 PSMD13Q9UNM6 376 aa9.04□□□□□ -0.96
NELFE-214ENST00000625905 WDR37Q9Y2I8 494 aa9.04□□□□□ -0.96
NELFE-214ENST00000625905 RPS6KL1Q9Y6S9 549 aa9.04□□□□□ -0.96
NELFE-214ENST00000625905 IGHV1OR21-1A0A087WYE8 117 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 C17orf113A0A1B0GUU1 675 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 MAGEB16A2A368 324 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 TMEM8BA6NDV4 472 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 LILRA5A6NI73 299 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 GOLGA8KD6RF30 607 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 GOLGA8TH3BQL2 631 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 PRMT5O14744 637 aaPredicted RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 PFDN6O15212 129 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 B4GAT1O43505 415 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 OR1I1O60431 355 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 NDUFS3O75489 264 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 USP1O94782 785 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 TUBB4AP04350 444 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 POLBP06746 335 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 PGAM1P18669 254 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 XRCC1P18887 633 aaPredicted RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 OGNP20774 298 aaKnown RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 IVDP26440 423 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 CSF2RBP32927 897 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 ITGA8P53708 1063 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 MRPS25P82663 173 aaKnown RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 DHX9Q08211 1270 aaKnown RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 CAMK2BQ13554 666 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 BOP1Q14137 746 aaKnown RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 CLCA4Q14CN2 919 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 TMED2Q15363 201 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 RPE65Q16518 533 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 HIF1AQ16665 826 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 WHAMMP3Q1A5X7 153 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 BBS9Q3SYG4 887 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 ANKRD20A4Q4UJ75 823 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 C3orf38Q5JPI3 329 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 PHF19Q5T6S3 580 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 NKAIN2Q5VXU1 208 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 METRNLQ641Q3 311 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 ZNF470Q6ECI4 717 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 HIBCHQ6NVY1 386 aaPredicted RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 DUS1LQ6P1R4 473 aaKnown RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 ZNF572Q7Z3I7 529 aaPredicted RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 MAATS1Q7Z4T9 603 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 B3GNT8Q7Z7M8 397 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 RBM12BQ8IXT5 1001 aaKnown RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 CFAP206Q8IYR0 622 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 PDIK1LQ8N165 341 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 AGGF1Q8N302 714 aaeCLIP9.03□□□□□ -0.96
NELFE-214ENST00000625905 LILRA3Q8N6C8 439 aaPredicted RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
NELFE-214ENST00000625905 BBOF1Q8ND07 529 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 GPR150Q8NGU9 434 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 ZCCHC14Q8WYQ9 949 aaKnown RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 ELMO1Q92556 727 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 ATXN7L3BQ96GX2 97 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 RMDN2Q96LZ7 410 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 C12orf66Q96MD2 445 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 NUDT22Q9BRQ3 303 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 STRADBQ9C0K7 418 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 NRSN2Q9GZP1 204 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 EPB41L1Q9H4G0 881 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 UCK1Q9HA47 277 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 RDH14Q9HBH5 336 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 ZNF624Q9P2J8 865 aaPredicted RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 GNPTGQ9UJJ9 305 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 CDC23Q9UJX2 597 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 ENTPD2Q9Y5L3 495 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 CFAP20Q9Y6A4 193 aaKnown RBP9.03□□□□□ -0.96
NELFE-214ENST00000625905 PRSS21Q9Y6M0 314 aa9.03□□□□□ -0.96
NELFE-214ENST00000625905 CCDC187A0A096LP49 1063 aa9.02□□□□□ -0.97
NELFE-214ENST00000625905 ZCWPW2A0A1B0GU75 182 aa9.02□□□□□ -0.97
NELFE-214ENST00000625905 UBA6A0AVT1 1052 aaPredicted RBP9.02□□□□□ -0.97
NELFE-214ENST00000625905 TRABD2BA6NFA1 517 aa9.02□□□□□ -0.97
NELFE-214ENST00000625905 TMX2-CTNND1H3BSU7 103 aa9.02□□□□□ -0.97
NELFE-214ENST00000625905 IFRD1O00458 451 aaPredicted RBP9.02□□□□□ -0.97
NELFE-214ENST00000625905 LIN7AO14910 233 aaPredicted RBP9.02□□□□□ -0.97
NELFE-214ENST00000625905 RAD51CO43502 376 aa9.02□□□□□ -0.97
NELFE-214ENST00000625905 BANF1O75531 89 aa9.02□□□□□ -0.97
NELFE-214ENST00000625905 ITGB6P18564 788 aa9.02□□□□□ -0.97
NELFE-214ENST00000625905 CD1CP29017 333 aa9.02□□□□□ -0.97
NELFE-214ENST00000625905 CCKBRP32239 447 aa9.02□□□□□ -0.97
NELFE-214ENST00000625905 SLC19A1P41440 591 aa9.02□□□□□ -0.97
NELFE-214ENST00000625905 RPL21P46778 160 aaKnown RBP9.02□□□□□ -0.97
NELFE-214ENST00000625905 PREPP48147 710 aa9.02□□□□□ -0.97
NELFE-214ENST00000625905 ARCN1P48444 511 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms