RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ABRQ12979 859 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 NFE2L1Q14494 772 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 PLEKHS1Q5SXH7 462 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 ZFYVE27Q5T4F4 411 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 SASS6Q6UVJ0 657 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 ZNF517Q6ZMY9 492 aaPredicted RBP14.33□□□□□ -0.12
PNKP-218ENST00000625299 FAM83HQ6ZRV2 1179 aaPredicted RBP14.33□□□□□ -0.12
PNKP-218ENST00000625299 CNTD1Q8N815 330 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 TTC13Q8NBP0 860 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 OR8K5Q8NH50 307 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 FAM71BQ8TC56 605 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 HDAC11Q96DB2 347 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 PPM1MQ96MI6 270 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 VPS35Q96QK1 796 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 TRIB3Q96RU7 358 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 SMAD5Q99717 465 aaKnown RBP14.33□□□□□ -0.12
PNKP-218ENST00000625299 ZNF670Q9BS34 389 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 NLNQ9BYT8 704 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 SLC7A5P2Q9GIP4 190 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 ILKAPQ9H0C8 392 aaPredicted RBP14.33□□□□□ -0.12
PNKP-218ENST00000625299 AIPL1Q9NZN9 384 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 PCSK5Q92824 1860 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 OR6C74A6NCV1 312 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 OR2AG2A6NM03 316 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 POP7O75817 140 aaKnown RBP14.32□□□□□ -0.12
PNKP-218ENST00000625299 MTHFD1P11586 935 aaKnown RBP14.32□□□□□ -0.12
PNKP-218ENST00000625299 ELAVL4P26378 380 aaKnown RBP14.32□□□□□ -0.12
PNKP-218ENST00000625299 HNRNPH3P31942 346 aaKnown RBP14.32□□□□□ -0.12
PNKP-218ENST00000625299 OTX2P32243 289 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 KPNA2P52292 529 aaKnown RBP14.32□□□□□ -0.12
PNKP-218ENST00000625299 AP1B1Q10567 949 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 SLC10A2Q12908 348 aaPredicted RBP14.32□□□□□ -0.12
PNKP-218ENST00000625299 PTCHD3Q3KNS1 767 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 VWA5B1Q5TIE3 1220 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 HGSNATQ68CP4 663 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 FAM198BQ6UWH4 519 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 CPNE8Q86YQ8 564 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 RAB43Q86YS6 212 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 SYTL1Q8IYJ3 562 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 RASGEF1AQ8N9B8 481 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 GLIS1Q8NBF1 620 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 LRFN5Q96NI6 719 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 AGAP3Q96P47 875 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 RANBP9Q96S59 729 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 HSD3B7Q9H2F3 369 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 CBX8Q9HC52 389 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 ANO10Q9NW15 660 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 FAM8A1Q9UBU6 413 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 B3GNT3Q9Y2A9 372 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 SPO11Q9Y5K1 396 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 CROCCQ5TZA2 2017 aa14.32□□□□□ -0.12
PNKP-218ENST00000625299 DIDO1Q9BTC0 2240 aaKnown RBP14.31□□□□□ -0.12
PNKP-218ENST00000625299 ARHGAP10A1A4S6 786 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 TMEM150CB9EJG8 249 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 MYO1FO00160 1098 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 GPR39O43194 453 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 CYP2A7P20853 494 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 CDH3P22223 829 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 CTSCP53634 463 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 IFI35P80217 286 aaPredicted RBP14.31□□□□□ -0.12
PNKP-218ENST00000625299 NAA30Q147X3 362 aaPredicted RBP14.31□□□□□ -0.12
PNKP-218ENST00000625299 STX1AQ16623 288 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 LYPLAL1Q5VWZ2 237 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 CCDC70Q6NSX1 233 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 TMEM220Q6QAJ8 160 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 NT5DC3Q86UY8 548 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 PQLC3Q8N755 202 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 BRSK1Q8TDC3 778 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 C12orf66Q96MD2 445 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 ZCCHC2Q9C0B9 1178 aaKnown RBP14.31□□□□□ -0.12
PNKP-218ENST00000625299 WWP1Q9H0M0 922 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 ACTR5Q9H9F9 607 aaPredicted RBP14.31□□□□□ -0.12
PNKP-218ENST00000625299 LATS2Q9NRM7 1088 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 PCMTD2Q9NV79 361 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 HEY1Q9Y5J3 304 aa14.31□□□□□ -0.12
PNKP-218ENST00000625299 COPG1Q9Y678 874 aaKnown RBP14.31□□□□□ -0.12
PNKP-218ENST00000625299 SLC9B1P1A6NJY1 282 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 C9J4A7 227 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 KCNJ13O60928 360 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 MT-CYBP00156 380 aaPredicted RBP14.3□□□□□ -0.12
PNKP-218ENST00000625299 POLR2CP19387 275 aaPredicted RBP14.3□□□□□ -0.12
PNKP-218ENST00000625299 HLA-DPA1P20036 260 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 POU3F2P20265 443 aaPredicted RBP14.3□□□□□ -0.12
PNKP-218ENST00000625299 RORAP35398 523 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 GLRBP48167 497 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 PPIDQ08752 370 aaKnown RBP14.3□□□□□ -0.12
PNKP-218ENST00000625299 DMPKQ09013 629 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 NCF4Q15080 339 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 PDK2Q15119 407 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 PPP2R5EQ16537 467 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 FAM151BQ6UXP7 276 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 DET1Q7L5Y6 550 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 MAP7D3Q8IWC1 876 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 BEND7Q8N7W2 519 aaPredicted RBP14.3□□□□□ -0.12
PNKP-218ENST00000625299 OR1L3Q8NH93 324 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 SPATA22Q8NHS9 363 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 MARVELD3Q96A59 401 aa14.3□□□□□ -0.12
PNKP-218ENST00000625299 IMP4Q96G21 291 aaKnown RBP14.3□□□□□ -0.12
PNKP-218ENST00000625299 INSM2Q96T92 566 aaPredicted RBP14.3□□□□□ -0.12
PNKP-218ENST00000625299 RTN4Q9NQC3 1192 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms