RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 IL26Q9NPH9 171 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 HEBP1Q9NRV9 189 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 MRPL17Q9NRX2 175 aaKnown RBP8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 MAFFQ9ULX9 164 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 SLC4A7Q9Y6M7 1214 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 TRBV5-4A0A0C4DH59 114 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 GRXCR2A6NFK2 248 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 SLC25A14O95258 325 aaPredicted RBP8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 CLDN7O95471 211 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 GPIP06744 558 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 CKMT2P17540 419 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 ITGB6P18564 788 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 ACRV1P26436 265 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 IL12AP29459 219 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 CA5AP35218 305 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 HNF1BP35680 557 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 CASP2P42575 452 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 EEFSECP57772 596 aaKnown RBP8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 EMX2Q04743 252 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 LIPEQ05469 1076 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 PRKG2Q13237 762 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 CDKN3Q16667 212 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 TIGD2Q4W5G0 525 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 RABL3Q5HYI8 236 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 CWF19L1Q69YN2 538 aaKnown RBP8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 ISLR2Q6UXK2 745 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 DDX53Q86TM3 631 aaKnown RBP8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 METTL3Q86U44 580 aaKnown RBP8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 CARM1Q86X55 608 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZFAND4Q86XD8 727 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 PACRGLQ8N7B6 248 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZNF784Q8NCA9 323 aaPredicted RBP8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 OR4F6Q8NGB9 312 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 FAM110BQ8TC76 370 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZNF689Q96CS4 500 aaPredicted RBP8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 TRIM8Q9BZR9 551 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 ATP13A3Q9H7F0 1226 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 IPPKQ9H8X2 491 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 SPG21Q9NZD8 308 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 PTBP2Q9UKA9 531 aaKnown RBP8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 PADI4Q9UM07 663 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZNF510Q9Y2H8 683 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 OARD1Q9Y530 152 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 TRIM17Q9Y577 477 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 PRSS21Q9Y6M0 314 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 COMMD3-BMI1R4GMX3 469 aa8.2□□□□□ -1.1
SND1-IT1-201ENST00000623342 PRRC2BQ5JSZ5 2229 aaKnown RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 GLYATL1P3A0A0U1RQE8 302 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 SOCS2O14508 198 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 TAPBPO15533 448 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 TRIM16O95361 564 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 IGSF6O95976 241 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 BPIP17213 487 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 FASP25445 335 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 GABRR2P28476 465 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 HMOX2P30519 316 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 GKP32189 559 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 SPAM1P38567 509 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 HTR6P50406 440 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 LMAN2Q12907 356 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 APOFQ13790 326 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 NR6A1Q15406 480 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 FUT11Q495W5 492 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 GPR33Q49SQ1 333 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 AASDHQ4L235 1098 aaPredicted RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 MPPE1Q53F39 396 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 INTS11Q5TA45 600 aaKnown RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 GRAMD4Q6IC98 578 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 NANOGP8Q6NSW7 305 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 SLC39A5Q6ZMH5 540 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 HTR3DQ70Z44 454 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 MILR1Q7Z6M3 343 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 IFNEQ86WN2 208 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 KIAA2013Q8IYS2 634 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 ADGRG5Q8IZF4 528 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 CPXM2Q8N436 756 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 DPP10Q8N608 796 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZBTB2Q8N680 514 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 CLDN19Q8N6F1 224 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 LKAAEAR1Q8TD35 194 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 DGCR14Q96DF8 476 aaKnown RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 TMEM79Q9BSE2 394 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 C17orf80Q9BSJ5 609 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 NSUN3Q9H649 340 aaKnown RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 NANOGQ9H9S0 305 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 PAK6Q9NQU5 681 aaPredicted RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 AGPAT4Q9NRZ5 378 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 ABCB8Q9NUT2 735 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 KIAA1522Q9P206 1035 aaPredicted RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 CRLS1Q9UJA2 301 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 RNF11Q9Y3C5 154 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 SH3BP1Q9Y3L3 701 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 KANSL1LA0AUZ9 987 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 SAC3D1A6NKF1 404 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 IFRD1O00458 451 aaPredicted RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 LSM1O15116 133 aaKnown RBP8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 INPP4BO15327 924 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 KATNA1O75449 491 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 OR6B1O95007 311 aa8.19□□□□□ -1.1
SND1-IT1-201ENST00000623342 GUCA1CO95843 209 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms