RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 PHC1P78364 1004 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 RAPSNQ13702 412 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 NPTX1Q15818 432 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 GRIK4Q16099 956 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 ATP6AP1LQ52LC2 224 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 C6orf136Q5SQH8 315 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 PRR23BQ6ZRT6 265 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 PRSS48Q7RTY5 328 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 ITCHQ96J02 903 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 CCDC115Q96NT0 180 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 C17orf80Q9BSJ5 609 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 GORASP2Q9H8Y8 452 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 ACTR8Q9H981 624 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 LIMD1Q9UGP4 676 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 RNF112Q9ULX5 631 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 INVSQ9Y283 1065 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 NEUROG3Q9Y4Z2 214 aa13.93□□□□□ -0.18
LDB3-209ENST00000623056 MYBPHLA2RUH7 354 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 HHLA1C9JL84 531 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 M0QX08 132 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 GSTA4O15217 222 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 SLC16A6O15403 523 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 ASNA1O43681 348 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 GOT2P00505 430 aaKnown RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 KCNE1P15382 129 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 FMO3P31513 532 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 TGFBR1P36897 503 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 DCTP40126 519 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 MASP1P48740 699 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 MAXP61244 160 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 PLIN5Q00G26 463 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 CLCA4Q14CN2 919 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 TXNDC11Q6PKC3 985 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 CCDC81Q6ZN84 652 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 FKBP9P1Q75LS8 142 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 VASH1Q7L8A9 365 aaPredicted RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 EFL1Q7Z2Z2 1120 aaKnown RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 B3GNT8Q7Z7M8 397 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 NUDT8Q8WV74 236 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 RPL3LQ92901 407 aaKnown RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 IMP4Q96G21 291 aaKnown RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 PCED1BQ96HM7 432 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 REXO5Q96IC2 774 aaKnown RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 TBATAQ96M53 351 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 CLSTN3Q9BQT9 956 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 C16orf70Q9BSU1 422 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 TRPV5Q9NQA5 729 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 ADGRE2Q9UHX3 823 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 TMEFF2Q9UIK5 374 aaPredicted RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 IKZF3Q9UKT9 509 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 TESMINQ9Y4I5 508 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 ANKRD34BA5PLL1 514 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 RGS13O14921 159 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 FGF10O15520 208 aaPredicted RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 ECI2O75521 394 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 DLGAP3O95886 979 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 CCR1P32246 355 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 AGTR2P50052 363 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 DGKQP52824 942 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 ITKQ08881 620 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 IL18R1Q13478 541 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 SEMA3AQ14563 771 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 VARS2Q5ST30 1063 aaKnown RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 SYT6Q5T7P8 510 aaPredicted RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 DCP2Q8IU60 420 aaKnown RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 EID3Q8N140 333 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 AADATQ8N5Z0 425 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 OR2T12Q8NG77 320 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 STAG3L4Q8TBR4 150 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 KIAA1191Q96A73 305 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 OSMRQ99650 979 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 CATSPERBQ9H7T0 1116 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 POPDC3Q9HBV1 291 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.92□□□□□ -0.18
LDB3-209ENST00000623056 AASSQ9UDR5 926 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 OSGIN1Q9UJX0 560 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 PNMA8BQ9ULN7 279 aaPredicted RBP13.92□□□□□ -0.18
LDB3-209ENST00000623056 CSADQ9Y600 493 aa13.92□□□□□ -0.18
LDB3-209ENST00000623056 ILVBLA1L0T0 632 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 A6NL46 340 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 DYRK3O43781 588 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 PRKD3O94806 890 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 CYP11A1P05108 521 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 SPNP16150 400 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 HOXC13P31276 330 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 CYP2C18P33260 490 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 SEPHS1P49903 392 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 DMPKQ09013 629 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 PWP1Q13610 501 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 IHHQ14623 411 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 RBBP7Q16576 425 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 PLA2G4EQ3MJ16 856 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 MANEALQ5VSG8 457 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 STEAP3Q658P3 488 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 PLD3Q8IV08 490 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 FAM126BQ8IXS8 530 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 SVOPQ8N4V2 548 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 POC5Q8NA72 575 aa13.91□□□□□ -0.18
LDB3-209ENST00000623056 OR5K1Q8NHB7 308 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms