RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 IFRD1O00458 451 aaPredicted RBP12.8□□□□□ -0.36
ATRX-208ENST00000622960 DDX3YO15523 660 aaKnown RBP12.8□□□□□ -0.36
ATRX-208ENST00000622960 IFNB1P01574 187 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 C9P02748 559 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 PRB1P04280 392 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 CCDC175P0C221 793 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 MTHFD1P11586 935 aaKnown RBP12.8□□□□□ -0.36
ATRX-208ENST00000622960 SFTPCP11686 197 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 ATP1B2P14415 290 aaPredicted RBP12.8□□□□□ -0.36
ATRX-208ENST00000622960 BRAFP15056 766 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 NDUFS1P28331 727 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 SEPHS1P49903 392 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 ZNF140P52738 457 aaPredicted RBP12.8□□□□□ -0.36
ATRX-208ENST00000622960 GFERP55789 205 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 PRKAA1Q13131 559 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 KLF1Q13351 362 aaPredicted RBP12.8□□□□□ -0.36
ATRX-208ENST00000622960 OLIG2Q13516 323 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 SPARCL1Q14515 664 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 PTPRCAPQ14761 206 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 BCL7AQ4VC05 210 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 CACHD1Q5VU97 1274 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 PPP1R21Q6ZMI0 780 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 PRSS42Q7Z5A4 293 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 ZNF605Q86T29 641 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 OOSP2Q86WS3 158 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 RASGRP3Q8IV61 690 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 NXPE1Q8N323 547 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 BMPERQ8N8U9 685 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 HM13Q8TCT9 377 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 UBXN4Q92575 508 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 TTC9Q92623 222 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 RSC1A1Q92681 617 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 NKD1Q969G9 470 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 RTP4Q96DX8 246 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 MED8Q96G25 268 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 C12orf66Q96MD2 445 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 CCM2Q9BSQ5 444 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 ULBP3Q9BZM4 244 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 WWP1Q9H0M0 922 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 ZNF768Q9H5H4 540 aaKnown RBP12.8□□□□□ -0.36
ATRX-208ENST00000622960 GPN2Q9H9Y4 310 aaPredicted RBP12.8□□□□□ -0.36
ATRX-208ENST00000622960 PDE7BQ9NP56 450 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 ZNF148Q9UQR1 794 aa12.8□□□□□ -0.36
ATRX-208ENST00000622960 PRR19A6NJB7 356 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 ZNF891A8MT65 544 aaPredicted RBP12.79□□□□□ -0.36
ATRX-208ENST00000622960 GAPDHSO14556 408 aaPredicted RBP12.79□□□□□ -0.36
ATRX-208ENST00000622960 MAP3K7O43318 606 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 STK17BO94768 372 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 AP2A1O95782 977 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 GSTM1P09488 218 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 FDFT1P37268 417 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 MC1RQ01726 317 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 GSTM4Q03013 218 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 CDH17Q12864 832 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 LY6DQ14210 128 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 IL11RAQ14626 422 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 POU6F1Q14863 301 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 CLCA4Q14CN2 919 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 RPS6KA1Q15418 735 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 RPE65Q16518 533 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 SKIDA1Q1XH10 827 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 DNTTIP2Q5QJE6 756 aaKnown RBP12.79□□□□□ -0.36
ATRX-208ENST00000622960 METRNLQ641Q3 311 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 FAM92BQ6ZTR7 304 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 TAB3Q8N5C8 712 aaPredicted RBP12.79□□□□□ -0.36
ATRX-208ENST00000622960 ESX1Q8N693 406 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 SIDT2Q8NBJ9 832 aaKnown RBP12.79□□□□□ -0.36
ATRX-208ENST00000622960 STYXQ8WUJ0 223 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 ZFPM2Q8WW38 1151 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 MAIP1Q8WWC4 291 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 PMEPA1Q969W9 287 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 STAMBPL1Q96FJ0 436 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 DNAJC1Q96KC8 554 aaKnown RBP12.79□□□□□ -0.36
ATRX-208ENST00000622960 CD180Q99467 661 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 RAB33BQ9H082 229 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 ZDHHC3Q9NYG2 299 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 EPHA6Q9UF33 1036 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 WDR37Q9Y2I8 494 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 KCTD3Q9Y597 815 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 HEMK1Q9Y5R4 338 aaPredicted RBP12.79□□□□□ -0.36
ATRX-208ENST00000622960 ATRXP46100 2492 aa12.79□□□□□ -0.36
ATRX-208ENST00000622960 UBA6A0AVT1 1052 aaPredicted RBP12.78□□□□□ -0.36
ATRX-208ENST00000622960 MATN2O00339 956 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 METTL18O95568 372 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 MT-ND3P03897 115 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 LIFP15018 202 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 PPARGP37231 505 aaPredicted RBP12.78□□□□□ -0.36
ATRX-208ENST00000622960 LEPRP48357 1165 aaKnown RBP12.78□□□□□ -0.36
ATRX-208ENST00000622960 PRLHRP49683 370 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 GDF10P55107 478 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 CACNG1Q06432 222 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 ABHD18Q0P651 414 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 TMTC4Q5T4D3 741 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 KCTD11Q693B1 232 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 FAM83HQ6ZRV2 1179 aaPredicted RBP12.78□□□□□ -0.36
ATRX-208ENST00000622960 PPP1R3BQ86XI6 285 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 CFAP206Q8IYR0 622 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 GPR150Q8NGU9 434 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 SLC35B2Q8TB61 432 aa12.78□□□□□ -0.36
ATRX-208ENST00000622960 ATG4AQ8WYN0 398 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms