RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PHACTR1Q9C0D0 580 aa18.24■□□□□ 0.51
CIRBP-245ENST00000621399 P2RY12Q9H244 342 aa18.24■□□□□ 0.51
CIRBP-245ENST00000621399 INTS10Q9NVR2 710 aaKnown RBP18.24■□□□□ 0.51
CIRBP-245ENST00000621399 TOR4AQ9NXH8 423 aa18.24■□□□□ 0.51
CIRBP-245ENST00000621399 MTRF1LQ9UGC7 380 aaKnown RBP18.24■□□□□ 0.51
CIRBP-245ENST00000621399 VPS9D1Q9Y2B5 631 aa18.24■□□□□ 0.51
CIRBP-245ENST00000621399 OR5K4A6NMS3 321 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 RFPL3O75679 317 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 S1PR4O95977 384 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 GSTM1P09488 218 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 SLC1A2P43004 574 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 CARSP49589 748 aaKnown RBP18.23■□□□□ 0.51
CIRBP-245ENST00000621399 EIF3BP55884 814 aaKnown RBP18.23■□□□□ 0.51
CIRBP-245ENST00000621399 GSTM4Q03013 218 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 ILKQ13418 452 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 AGAP9Q5VTM2 703 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 ABRAXAS1Q6UWZ7 409 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 WASH2PQ6VEQ5 465 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 C17orf82Q86X59 251 aaPredicted RBP18.23■□□□□ 0.51
CIRBP-245ENST00000621399 IFT20Q8IY31 132 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 SFRP1Q8N474 314 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 GSDMBQ8TAX9 411 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 LPGAT1Q92604 370 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 NAT6Q93015 286 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 WASH6PQ9NQA3 447 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 FBXO6Q9NRD1 293 aaPredicted RBP18.23■□□□□ 0.51
CIRBP-245ENST00000621399 LRIT1Q9P2V4 623 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 GNPTGQ9UJJ9 305 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 FBXO5Q9UKT4 447 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 ACSL5Q9ULC5 683 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 CRYL1Q9Y2S2 319 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 PCDHGA1Q9Y5H4 931 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 RNF215Q9Y6U7 377 aa18.23■□□□□ 0.51
CIRBP-245ENST00000621399 COL5A1P20908 1838 aaPredicted RBP18.23■□□□□ 0.51
CIRBP-245ENST00000621399 ARID1BQ8NFD5 2236 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-245ENST00000621399 KIR2DS5A0A0G2JLQ3 304 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 A0A0G2JNG1 304 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 KIR2DS3K7RE56 304 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 TRIM16O95361 564 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 GLB1P16278 677 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 ITGB6P18564 788 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 RPS3P23396 243 aaKnown RBP eCLIP18.22■□□□□ 0.51
CIRBP-245ENST00000621399 FMO4P31512 558 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 HALP42357 657 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 MAGEA4P43358 317 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 FRG1Q14331 258 aaKnown RBP18.22■□□□□ 0.51
CIRBP-245ENST00000621399 KIR2DS5Q14953 304 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 TEX35Q5T0J7 233 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 ZNF449Q6P9G9 518 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 TRMT10BQ6PF06 316 aaKnown RBP18.22■□□□□ 0.51
CIRBP-245ENST00000621399 CAPN12Q6ZSI9 719 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 SLC9B2Q86UD5 537 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 SLC37A2Q8TED4 501 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 ELMO1Q92556 727 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 SCHIP1Q9P0W5 487 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-245ENST00000621399 PSMD13Q9UNM6 376 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 WDR37Q9Y2I8 494 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 PCDHB1Q9Y5F3 818 aa18.22■□□□□ 0.51
CIRBP-245ENST00000621399 RHPN2P1A8MT19 583 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 IQCF5A8MTL0 148 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 NUDT21O43809 227 aaKnown RBP18.21■□□□□ 0.51
CIRBP-245ENST00000621399 ESR1P03372 595 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 GP1BAP07359 652 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 F7P08709 466 aaPredicted RBP18.21■□□□□ 0.51
CIRBP-245ENST00000621399 BRAFP15056 766 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 ADARP55265 1226 aaKnown RBP18.21■□□□□ 0.51
CIRBP-245ENST00000621399 MPP1Q00013 466 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 CUL1Q13616 776 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 SYTL3Q4VX76 610 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 ZNF789Q5FWF6 425 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 PERM1Q5SV97 790 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 N4BP2L1Q5TBK1 243 aaPredicted RBP18.21■□□□□ 0.51
CIRBP-245ENST00000621399 CEP128Q6ZU80 1094 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 KRT222Q8N1A0 295 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 LILRA3Q8N6C8 439 aaPredicted RBP18.21■□□□□ 0.51
CIRBP-245ENST00000621399 CCDC74AQ96AQ1 378 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 C9orf72Q96LT7 481 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 BIRC8Q96P09 236 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 WWP1Q9H0M0 922 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 TSPYL1Q9H0U9 437 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 ABCG4Q9H172 646 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 STN1Q9H668 368 aaKnown RBP18.21■□□□□ 0.51
CIRBP-245ENST00000621399 COG4Q9H9E3 785 aa18.21■□□□□ 0.51
CIRBP-245ENST00000621399 CNOT1A5YKK6 2376 aaKnown RBP18.21■□□□□ 0.51
CIRBP-245ENST00000621399 OR52A4PA6NMU1 304 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 H3BMM5 538 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 LIN7AO14910 233 aaPredicted RBP18.2■□□□□ 0.5
CIRBP-245ENST00000621399 HAUS5O94927 633 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 SLC35G4P0C7Q5 338 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 CDK4P11802 303 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 SSTR1P30872 391 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 E2F1Q01094 437 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 MGAT5Q09328 741 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 BOP1Q14137 746 aaKnown RBP18.2■□□□□ 0.5
CIRBP-245ENST00000621399 CLCA4Q14CN2 919 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 BRD3Q15059 726 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 ZNF658BQ4V348 819 aaPredicted RBP18.2■□□□□ 0.5
CIRBP-245ENST00000621399 CTSL3PQ5NE16 218 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 TEDDM1Q5T9Z0 273 aa18.2■□□□□ 0.5
CIRBP-245ENST00000621399 XKR5Q6UX68 686 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms